RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CCL4L1Q8NHW4 92 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 MCCC1Q96RQ3 725 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 BPIFA3Q9BQP9 254 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ADGRE3Q9BY15 652 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 KLHL25Q9H0H3 589 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 GPN2Q9H9Y4 310 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 RDH14Q9HBH5 336 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 NOD2Q9HC29 1040 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 SARS2Q9NP81 518 aaKnown RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 NT5MQ9NPB1 228 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 LMBRD1Q9NUN5 540 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 FOXJ2Q9P0K8 574 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ZNHIT2Q9UHR6 403 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 WDFY3Q8IZQ1 3526 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 EFCAB7A8K855 629 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 MAFKO60675 156 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 SERPINC1P01008 464 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 FGF3P11487 239 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 VCLP18206 1134 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 CR2P20023 1033 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 CCNCP24863 283 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 AK4P27144 223 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 HHEXQ03014 270 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ABHD18Q0P651 414 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 PDK2Q15119 407 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 BBS9Q3SYG4 887 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 TDRD12Q587J7 1177 aaKnown RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ODF2Q5BJF6 829 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ANKRD20A8PQ5CZ79 823 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ZFYVE27Q5T4F4 411 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 Q6ZVL8 140 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 HSD11B1LQ7Z5J1 315 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 POLNQ7Z5Q5 900 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 NAGSQ8N159 534 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ESX1Q8N693 406 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF564Q8TBZ8 553 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 SEC14L1Q92503 715 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ART4Q93070 314 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 FATE1Q969F0 183 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 CSPG4P5Q96PW8 444 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 NUDT22Q9BRQ3 303 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 YIPF2Q9BWQ6 316 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 XPO4Q9C0E2 1151 aaKnown RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 FBXO8Q9NRD0 319 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 A0A0J9YYE9 177 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 NPIPB15A6NHN6 443 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-214ENST00000477152 MATN3O15232 486 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 MTA2O94776 668 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 TRBC1P01850 177 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 MT-ND3P03897 115 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 CCL4P13236 92 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 UGT1A3P35503 534 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 MC2RQ01718 297 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 TRAF2Q12933 501 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 PYCR3Q53H96 274 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 FIGNQ5HY92 759 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 LRRC66Q68CR7 880 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 ARHGAP36Q6ZRI8 547 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 TECPR1Q7Z6L1 1165 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 NRROSQ86YC3 692 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 TRIM48Q8IWZ4 208 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 RBM12BQ8IXT5 1001 aaKnown RBP7.18□□□□□ -1.26
BRCA1-214ENST00000477152 CBARPQ8N350 705 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-214ENST00000477152 TEX26Q8N6G2 289 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 AOPEPQ8N6M6 819 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 NPWQ8N729 165 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 NIPA2Q8N8Q9 360 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 KCTD6Q8NC69 237 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 LRRN4CLQ8ND94 238 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 RCBTB1Q8NDN9 531 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 C9orf43Q8TAL5 461 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-214ENST00000477152 APOBEC4Q8WW27 367 aaKnown RBP7.18□□□□□ -1.26
BRCA1-214ENST00000477152 TP53INP1Q96A56 240 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 SLC45A3Q96JT2 553 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 PEBP4Q96S96 227 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 SPATA9Q9BWV2 254 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 SLC12A9Q9BXP2 914 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 ISCUQ9H1K1 167 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 ABCG8Q9H221 673 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 TAS2R14Q9NYV8 317 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 U3KQE9 123 aa7.18□□□□□ -1.26
BRCA1-214ENST00000477152 HELZ2Q9BYK8 2649 aaKnown RBP7.18□□□□□ -1.26
BRCA1-214ENST00000477152 ANKRD34BA5PLL1 514 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 AGRPO00253 132 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PPP1R12AO14974 1030 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 POLR1CO15160 346 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PPM1DO15297 605 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TOX3O15405 576 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 CBX7O95931 251 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TPM3P06753 285 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 KRT7P08729 469 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 CTPS1P17812 591 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 GM2AP17900 193 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TCN2P20062 427 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 CD247P20963 164 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 HSD3B2P26439 372 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 GARSP41250 739 aaKnown RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 POLE2P56282 527 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms