RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZBTB43O43298 467 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 DIAPH2O60879 1101 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 RPN1P04843 607 aaKnown RBP5.78□□□□□ -1.48
VPS50-212ENST00000476413 SCG2P13521 617 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 MYOD1P15172 320 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 GJA1P17302 382 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 PTAFRP25105 342 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 CTSCP53634 463 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 LINC00205P59089 165 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 COG7P83436 770 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 PDE1BQ01064 536 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 KLHL26Q53HC5 615 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 DCLRE1AQ6PJP8 1040 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 FIGLAQ6QHK4 219 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 GALNTL5Q7Z4T8 443 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 IQCHQ86VS3 1027 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 FAM9BQ8IZU0 186 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 B4GALNT2Q8NHY0 566 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 SLC20A1Q8WUM9 679 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 ZFAND2BQ8WV99 257 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 DNAAF4Q8WXU2 420 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 MRPS27Q92552 414 aaKnown RBP5.78□□□□□ -1.48
VPS50-212ENST00000476413 SECISBP2LQ93073 1101 aaKnown RBP5.78□□□□□ -1.48
VPS50-212ENST00000476413 PIGTQ969N2 578 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 SLA2Q9H6Q3 261 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 OCIAD1Q9NX40 245 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 RHCGQ9UBD6 479 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 RNF7Q9UBF6 113 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 IL17BQ9UHF5 180 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 DDX25Q9UHL0 483 aaKnown RBP5.78□□□□□ -1.48
VPS50-212ENST00000476413 PCDHAC2Q9Y5I4 1007 aa5.78□□□□□ -1.48
VPS50-212ENST00000476413 A0A0B4J293 547 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 LILRA5A6NI73 299 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 ZNF587BE7ETH6 402 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 RECQL5O94762 991 aaPredicted RBP5.77□□□□□ -1.49
VPS50-212ENST00000476413 CELF2O95319 508 aaKnown RBP5.77□□□□□ -1.49
VPS50-212ENST00000476413 LINGO3P0C6S8 592 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 PFKFB1P16118 471 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 GABRA5P31644 462 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 CCR10P46092 362 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 CD81P60033 236 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 SNRPEP62304 92 aaKnown RBP5.77□□□□□ -1.49
VPS50-212ENST00000476413 HYAL4Q2M3T9 481 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 TRAT1Q6PIZ9 186 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 GFRALQ6UXV0 394 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 C9orf47Q6ZRZ4 202 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 CENPVQ7Z7K6 275 aaPredicted RBP5.77□□□□□ -1.49
VPS50-212ENST00000476413 SATL1Q86VE3 508 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 MAP7D3Q8IWC1 876 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 ODF3L1Q8IXM7 274 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 OR52I2Q8NH67 350 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 TMED6Q8WW62 240 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 NXNL1Q96CM4 212 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 PHF21BQ96EK2 531 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 PRMT6Q96LA8 375 aaPredicted RBP5.77□□□□□ -1.49
VPS50-212ENST00000476413 ZNF582Q96NG8 517 aaPredicted RBP5.77□□□□□ -1.49
VPS50-212ENST00000476413 MS4A10Q96PG2 267 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 OR6C1Q96RD1 312 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 ADPGKQ9BRR6 497 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 SEMA6AQ9H2E6 1030 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 GAREM1Q9H706 876 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 NOL11Q9H8H0 719 aaKnown RBP5.77□□□□□ -1.49
VPS50-212ENST00000476413 SMARCAL1Q9NZC9 954 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 ZNF224Q9NZL3 707 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 SIX4Q9UIU6 781 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 AMDHD2Q9Y303 409 aa5.77□□□□□ -1.49
VPS50-212ENST00000476413 IGLV5-37A0A075B6J1 123 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 C5orf60A6NFR6 353 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 TMEM178BH3BS89 294 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 SLC16A5O15375 505 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 SSX4O60224 188 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 OR10H2O60403 315 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 LDB3O75112 727 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 DANCRP0C864 163 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 MATR3P43243 847 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS50-212ENST00000476413 RAB28P51157 221 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 CDK3Q00526 305 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 PPARDQ03181 441 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 SLC20A2Q08357 652 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 CALCRLQ16602 461 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 ARMC4Q5T2S8 1044 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 RNASEH2BQ5TBB1 312 aaKnown RBP5.76□□□□□ -1.49
VPS50-212ENST00000476413 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 FAM122CQ6P4D5 195 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 RAD9BQ6WBX8 426 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 GLRX5Q86SX6 157 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 TMPRSS12Q86WS5 348 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 TMEM219Q86XT9 240 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 THNSL1Q8IYQ7 743 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 C1orf52Q8N6N3 182 aaKnown RBP5.76□□□□□ -1.49
VPS50-212ENST00000476413 OR2AJ1Q8NGZ0 328 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 KIF18AQ8NI77 898 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 HDAC11Q96DB2 347 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 FCRL4Q96PJ5 515 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 SLC25A23Q9BV35 468 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 MOV10L1Q9BXT6 1211 aaKnown RBP5.76□□□□□ -1.49
VPS50-212ENST00000476413 KCNS2Q9ULS6 477 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 NOL7Q9UMY1 257 aaKnown RBP5.76□□□□□ -1.49
VPS50-212ENST00000476413 NFS1Q9Y697 457 aa5.76□□□□□ -1.49
VPS50-212ENST00000476413 CACNA1IQ9P0X4 2223 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms