RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RAB15P59190 212 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 SRSF6Q13247 344 aaKnown RBP15.93■□□□□ 0.14
COL1A1-205ENST00000476387 SNX1Q13596 522 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 PTPRCAPQ14761 206 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 KHDC1Q4VXA5 237 aaKnown RBP15.93■□□□□ 0.14
COL1A1-205ENST00000476387 GPRC6AQ5T6X5 926 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 KCTD11Q693B1 232 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 CCDC89Q8N998 374 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 DDHD1Q8NEL9 900 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 ANP32BQ92688 251 aaKnown RBP15.93■□□□□ 0.14
COL1A1-205ENST00000476387 ART4Q93070 314 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A7Q9HAW7 530 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A10Q9HAW8 530 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A8Q9HAW9 530 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 SMOXQ9NWM0 555 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 TMEM9Q9P0T7 183 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 FKBPLQ9UIM3 349 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 DNAJC16Q9Y2G8 782 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 PIKFYVEQ9Y2I7 2098 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 ERI2A8K979 691 aaKnown RBP15.92■□□□□ 0.14
COL1A1-205ENST00000476387 PDZK1P1A8MUH7 402 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 B8ZZF3 427 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 E7EVH7 732 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 GAPDHSO14556 408 aaPredicted RBP15.92■□□□□ 0.14
COL1A1-205ENST00000476387 SRP72O76094 671 aaKnown RBP15.92■□□□□ 0.14
COL1A1-205ENST00000476387 MPSTP25325 297 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 FDFT1P37268 417 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 ATP1A2P50993 1020 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 ARSDP51689 593 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 ZNF140P52738 457 aaPredicted RBP15.92■□□□□ 0.14
COL1A1-205ENST00000476387 NFATC2Q13469 925 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 SEPT6Q14141 434 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 DENND5AQ6IQ26 1287 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 LINC00523Q86TU6 105 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 VASH2Q86V25 355 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 ZNF761Q86XN6 746 aaPredicted RBP15.92■□□□□ 0.14
COL1A1-205ENST00000476387 OR13C4Q8NGS5 318 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 ZNF398Q8TD17 642 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 TEFMQ96QE5 360 aaKnown RBP15.92■□□□□ 0.14
COL1A1-205ENST00000476387 TLR10Q9BXR5 811 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 ASB8Q9H765 288 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 UCK1Q9HA47 277 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 PRDM8Q9NQV8 689 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 SLC39A1Q9NY26 324 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 CPNE7Q9UBL6 633 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 CRLS1Q9UJA2 301 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 ZKSCAN5Q9Y2L8 839 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 KCTD3Q9Y597 815 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 B3GALT1Q9Y5Z6 326 aa15.92■□□□□ 0.14
COL1A1-205ENST00000476387 LILRA5A6NI73 299 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 GAS8O95995 478 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 FGGP02679 453 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 MSH3P20585 1137 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 ITGALP20701 1170 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 UBE2IP63279 158 aaKnown RBP15.91■□□□□ 0.14
COL1A1-205ENST00000476387 TMPRSS15P98073 1019 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 POU6F1Q14863 301 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 SEPT7Q16181 437 aaKnown RBP15.91■□□□□ 0.14
COL1A1-205ENST00000476387 LONRF2Q1L5Z9 754 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 LINC00303Q3SY05 128 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 DCAF12Q5T6F0 453 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 ARHGAP22Q7Z5H3 698 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 FAM129CQ86XR2 697 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 ZNF547Q8IVP9 402 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 TRIM48Q8IWZ4 208 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 BMPERQ8N8U9 685 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 NKD1Q969G9 470 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 ULK4Q96C45 1275 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 C19orf43Q9BQ61 176 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 OCIAD1Q9NX40 245 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 PAK5Q9P286 719 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 SLC23A2Q9UGH3 650 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 SLC30A1Q9Y6M5 507 aa15.91■□□□□ 0.14
COL1A1-205ENST00000476387 OR2AG2A6NM03 316 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 EFCAB7A8K855 629 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 LDB2O43679 373 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 CEP104O60308 925 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 RALBP11234 206 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 IDSP22304 550 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 MSLNQ13421 630 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-205ENST00000476387 CCNG2Q16589 344 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 PPP1R21Q6ZMI0 780 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 RASGEF1AQ8N9B8 481 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 EXD3Q8N9H8 876 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 DNAAF3Q8N9W5 541 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 NCSTNQ92542 709 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 PMEPA1Q969W9 287 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 DCUN1D1Q96GG9 259 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 ZNF514Q96K75 400 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-205ENST00000476387 DNAJC1Q96KC8 554 aaKnown RBP15.9■□□□□ 0.14
COL1A1-205ENST00000476387 ZPBPQ9BS86 351 aa15.9■□□□□ 0.14
COL1A1-205ENST00000476387 BOD1L1Q8NFC6 3051 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 PRR19A6NJB7 356 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 CFAP99D6REC4 459 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 J3QKU1 62 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 ZSCAN12O43309 604 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 KCNJ13O60928 360 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 SFTPCP11686 197 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 TPH1P17752 444 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 XRCC1P18887 633 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms