RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ERVFC1-1P60608 527 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 IFI35P80217 286 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-211ENST00000476215 C15orf59Q2T9L4 293 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-211ENST00000476215 BMP2KLQ5H9B9 411 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 MFSD4BQ5TF39 518 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 KRT79Q5XKE5 535 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 INTS8Q75QN2 995 aaKnown RBP4.76□□□□□ -1.65
PTCD3-211ENST00000476215 GBGT1Q8N5D6 347 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 CCDC89Q8N998 374 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 OR52I2Q8NH67 350 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 TBC1D16Q8TBP0 767 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 CD101Q93033 1021 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 LINGO1Q96FE5 620 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 CENPOQ9BU64 300 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTCD3-211ENST00000476215 CPSF2Q9P2I0 782 aaKnown RBP4.76□□□□□ -1.65
PTCD3-211ENST00000476215 HACL1Q9UJ83 578 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 ZNF711Q9Y462 761 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 BUB3O43684 328 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 BUD23O43709 281 aaKnown RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 ZWINTO95229 277 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 BMP10O95393 424 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 LMAN1P49257 510 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 ARSEP51690 589 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 KRTAP10-6P60371 365 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 SNRPEP62304 92 aaKnown RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 RPL36AP83881 106 aaKnown RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 POU3F1Q03052 451 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 TROAPQ12815 778 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 BECN1Q14457 450 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 RAB6CQ53S08 254 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 HAUS6Q7Z4H7 955 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 GALNT5Q7Z7M9 940 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 DSG4Q86SJ6 1040 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 DNAAF5Q86Y56 855 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 MAB21L3Q8N8X9 362 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 OXNAD1Q96HP4 312 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 NEUROD6Q96NK8 337 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 CDRT15Q96T59 188 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 PKP4Q99569 1192 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 POLR3CQ9BUI4 534 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 SPATC1LQ9H0A9 340 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 RAB6CQ9H0N0 254 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 FKRPQ9H9S5 495 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 PLSCR4Q9NRQ2 329 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 ANKEF1Q9NU02 776 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 ABCF3Q9NUQ8 709 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 LARSQ9P2J5 1176 aaKnown RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 PROCRQ9UNN8 238 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 YIPF1Q9Y548 306 aa4.75□□□□□ -1.65
PTCD3-211ENST00000476215 MAGED1Q9Y5V3 778 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-211ENST00000476215 LOC102723996A0A087X1L8 192 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 OR2M5A3KFT3 312 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 GLOD5A6NK44 160 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 A6NL46 340 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 H0YIN7 160 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 ADAM20O43506 726 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 WISP2O76076 250 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 KRT19P08727 400 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 VPREB1P12018 145 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 AHRP35869 848 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 MATR3P43243 847 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 ARCN1P48444 511 aaKnown RBP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 FMO5P49326 533 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 TERF1P54274 439 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 GRAPQ13588 217 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 ALS2CLQ60I27 953 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 WBP2NLQ6ICG8 309 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 TMCO3Q6UWJ1 677 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 KCTD8Q6ZWB6 473 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 LDB1Q86U70 411 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 DCP1BQ8IZD4 617 aaKnown RBP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 PTPMT1Q8WUK0 201 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 LMLNQ96KR4 655 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 GCNAQ96QF7 691 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 ABHD1Q96SE0 405 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 APOL6Q9BWW8 343 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 KLHL4Q9C0H6 718 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 PPIL3Q9H2H8 161 aaKnown RBP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 KCNK15Q9H427 330 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 DENND2DQ9H6A0 471 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 ZNF556Q9HAH1 456 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 TRPC7Q9HCX4 862 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 POLG2Q9UHN1 485 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 PPIEQ9UNP9 301 aaKnown RBP4.74□□□□□ -1.65
PTCD3-211ENST00000476215 SCRIBQ14160 1630 aa4.74□□□□□ -1.65
PTCD3-211ENST00000476215 PASKQ96RG2 1323 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 A0A1W2PS18 150 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 C15orf62A8K5M9 175 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 C16orf97H3BN30 126 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 SH2B2O14492 632 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-211ENST00000476215 BCL10O95999 233 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 TPOP07202 933 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 NR2F1P10589 423 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 CETPP11597 493 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 GJA1P17302 382 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 AMD1P17707 334 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 GM2AP17900 193 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 MLLT10P55197 1068 aa4.73□□□□□ -1.65
PTCD3-211ENST00000476215 SIRPAP78324 504 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms