RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ZFR2Q9UPR6 939 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SORCS3Q9UPU3 1222 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 MTF2Q9Y483 593 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 PLXNA2O75051 1894 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 KRBA1A5PL33 1030 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PRR33A8MZF0 331 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 F8W8V4 182 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PLK4O00444 970 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 KPNA5O15131 536 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 DCXO43602 365 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ZBTB14O43829 449 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 VEGFDO43915 354 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 NUAK1O60285 661 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 DLX3O60479 287 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 MAGEC1O60732 1142 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 TRIM13O60858 407 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 MMP20O60882 483 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 KERAO60938 352 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 DNAJC6O75061 913 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 TM7SF2O76062 418 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 DXOO77932 396 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 SLCO2B1O94956 709 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 DNTTP04053 509 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 OR56A5P0C7T3 313 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 RALBP11234 206 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ENO3P13929 434 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 SAT1P21673 171 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 BGNP21810 368 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ATP5F1P24539 256 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 AOAHP28039 575 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ARRB2P32121 409 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 CCR7P32248 378 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PRLHRP49683 370 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ADPRHP54922 357 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 IL2P60568 153 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 RPS21P63220 83 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 GALNT1Q10472 559 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 BST1Q10588 318 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 FGL2Q14314 439 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 CSHL1Q14406 222 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ACOX1Q15067 660 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 WSCD2Q2TBF2 565 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 CDKL4Q5MAI5 379 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PLEKHS1Q5SXH7 462 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 LIPMQ5VYY2 423 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PTRHD1Q6GMV3 140 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 KLC3Q6P597 504 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 C6orf89Q6UWU4 347 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 XKR5Q6UX68 686 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ATG14Q6ZNE5 492 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 NEK10Q6ZWH5 1172 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 OTOAQ7RTW8 1153 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PHYKPLQ8IUZ5 450 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PELI3Q8N2H9 469 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ANKS4BQ8N8V4 417 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 SIDT2Q8NBJ9 832 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 TP53I13Q8NBR0 393 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 RPLP0P6Q8NHW5 317 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 STAG3L4Q8TBR4 150 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 LKAAEAR1Q8TD35 194 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 CXorf40AQ8TE69 158 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 FUBP1Q96AE4 644 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 CLDN23Q96B33 292 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 FAM122AQ96E09 287 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 NUS1Q96E22 293 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 L3HYPDHQ96EM0 354 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 SIPA1Q96FS4 1042 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 TSNARE1Q96NA8 513 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PANX3Q96QZ0 392 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PAIP2Q9BPZ3 127 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 WRAP53Q9BUR4 548 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 MECRQ9BV79 373 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 GATA5Q9BWX5 397 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 TEX101Q9BY14 249 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 PITPNM3Q9BZ71 974 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 DRC3Q9H069 523 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 RDH14Q9HBH5 336 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 SLCO1B3Q9NPD5 702 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ITM2CQ9NQX7 267 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 ARHGEF3Q9NR81 526 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 THAP1Q9NVV9 213 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 FBXL12Q9NXK8 326 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 USP36Q9P275 1121 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 XPR1Q9UBH6 696 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 GULP1Q9UBP9 304 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 CD84Q9UIB8 345 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 TRMT6Q9UJA5 497 aaKnown RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 TMCO1Q9UM00 188 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 GPR34Q9UPC5 381 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 CDYLQ9Y232 598 aa6.52□□□□□ -1.37
ATG4A-207ENST00000474825 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-207ENST00000474825 C17orf113A0A1B0GUU1 675 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 A0A1W2PP55 124 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 KANSL1LA0AUZ9 987 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SLC5A10A0PJK1 596 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 KLHL33A6NCF5 533 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 IGLON5A6NGN9 336 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 A8MT66 165 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms