RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 WASH2PQ6VEQ5 465 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 TMEM126BQ8IUX1 230 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 RNF214Q8ND24 703 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.71□□□□□ -0.21
CCDC78-209ENST00000474647 CPLX3Q8WVH0 158 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 MR1Q95460 341 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 FAF2Q96CS3 445 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 ZNF514Q96K75 400 aaPredicted RBP13.71□□□□□ -0.21
CCDC78-209ENST00000474647 VPS35Q96QK1 796 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 MAP3K3Q99759 626 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 RAB33BQ9H082 229 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 LUZP4Q9P127 313 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 EPHA6Q9UF33 1036 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 NOTCH2Q04721 2471 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 UBA6A0AVT1 1052 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-209ENST00000474647 LRRD1A4D1F6 860 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
CCDC78-209ENST00000474647 SCRG1O75711 98 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 RECKO95980 971 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 MT-CYBP00156 380 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-209ENST00000474647 FECHP22830 423 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 PTPN4P29074 926 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 ACY1Q03154 408 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 TMEM115Q12893 351 aaPredicted RBP13.7□□□□□ -0.22
CCDC78-209ENST00000474647 FIGNQ5HY92 759 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 CCDC70Q6NSX1 233 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 C11orf96Q7Z7L8 435 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 SYVN1Q86TM6 617 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 SPATA22Q8NHS9 363 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 THAP4Q8WY91 577 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 IMP4Q96G21 291 aaKnown RBP13.7□□□□□ -0.22
CCDC78-209ENST00000474647 SLC41A2Q96JW4 573 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 RNF157Q96PX1 679 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 GPR87Q9BY21 358 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 ING2Q9H160 280 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 RBSNQ9H1K0 784 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 FGF21Q9NSA1 209 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 IMP3Q9NV31 184 aaKnown RBP13.7□□□□□ -0.22
CCDC78-209ENST00000474647 TMPRSS11EQ9UL52 423 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 CFAP20Q9Y6A4 193 aaKnown RBP13.7□□□□□ -0.22
CCDC78-209ENST00000474647 ANKRD12Q6UB98 2062 aa13.7□□□□□ -0.22
CCDC78-209ENST00000474647 PCM1Q15154 2024 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 TLCD2A6NGC4 264 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 OR2AG2A6NM03 316 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 SEMA7AO75326 666 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 PMPCBO75439 489 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 KDELR1P24390 212 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 PTGIRP43119 386 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 NOMO1Q15155 1222 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 GPR19Q15760 415 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 CHRNA6Q15825 494 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 RPE65Q16518 533 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 PRR30Q53SZ7 412 aaPredicted RBP13.69□□□□□ -0.22
CCDC78-209ENST00000474647 NPNTQ6UXI9 565 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 AMZ2Q86W34 360 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 PLD5Q8N7P1 536 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 RAPGEF5Q92565 580 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 ZCCHC2Q9C0B9 1178 aaKnown RBP13.69□□□□□ -0.22
CCDC78-209ENST00000474647 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 CASS4Q9NQ75 786 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 SOHLH2Q9NX45 425 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 UBP1Q9NZI7 540 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 FAM8A1Q9UBU6 413 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 PCSK5Q92824 1860 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 LRBAP50851 2863 aa13.69□□□□□ -0.22
CCDC78-209ENST00000474647 SEC16AO15027 2179 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 A0A0A6YYK5 440 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 A0A1W2PQJ5 194 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 APOL1O14791 398 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 PPP1R12AO14974 1030 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 DDX3YO15523 660 aaKnown RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 GPR39O43194 453 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 SORBS2O94875 1100 aaKnown RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 NDST3O95803 873 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 RNF224P0DH78 156 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 ARCN1P48444 511 aaKnown RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 CTSCP53634 463 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 DYNLT1P63172 113 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 HSD11B2P80365 405 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 GPS2Q13227 327 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 XRCC4Q13426 336 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 NFE2L1Q14494 772 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 NR1I3Q14994 352 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 PPP2R5EQ16537 467 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 ARMC6Q6NXE6 501 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 DUS1LQ6P1R4 473 aaKnown RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 FAM151BQ6UXP7 276 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 FAM83HQ6ZRV2 1179 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 BPHLQ86WA6 291 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 OOSP2Q86WS3 158 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 BRSK1Q8TDC3 778 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 CTNNBL1Q8WYA6 563 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 SYN2Q92777 582 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 FCRL4Q96PJ5 515 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 MAK16Q9BXY0 300 aaKnown RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 MFRPQ9BY79 579 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms