RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 A0A1W2PQ67 120 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 GNGT2O14610 69 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 BCKDKO14874 412 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 AREL1O15033 823 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 TSPAN1O60635 241 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 KATNA1O75449 491 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 GOT2P00505 430 aaKnown RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 KRT8P05787 483 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 SLC26A3P40879 764 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 MRPL19P49406 292 aaKnown RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 SLC35A2P78381 396 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 OR4D1Q15615 310 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 TTC23LQ6PF05 361 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 DLEU7Q6UYE1 221 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 RAB44Q7Z6P3 723 aaPredicted RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 B3GNT8Q7Z7M8 397 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 TMEM179BQ7Z7N9 219 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 KIAA1958Q8N8K9 716 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 PABPC5Q96DU9 382 aaKnown RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 ZHX1-C8orf76Q96EF9 292 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 DUSP16Q9BY84 665 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 OPTCQ9UBM4 332 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 AKT3Q9Y243 479 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 ZNF236Q9UL36 1845 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 AGAP5A6NIR3 686 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 HBP1O60381 514 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 FADS2O95864 444 aaKnown RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 GTF2E2P29084 291 aaKnown RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 RABGGTBP53611 331 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 TRIP4Q15650 581 aaPredicted RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 FBXO48Q5FWF7 155 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 CCBE1Q6UXH8 406 aaPredicted RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 RANBP10Q6VN20 620 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 FIG4Q92562 907 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 PROX1Q92786 737 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 MRGPRX2Q96LB1 330 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 GAD1Q99259 594 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 RHNO1Q9BSD3 238 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 UGT2B28Q9BY64 529 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 DUSP21Q9H596 190 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 ANKHQ9HCJ1 492 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 SEMA4BQ9NPR2 832 aaPredicted RBP18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 ITM2CQ9NQX7 267 aa18.4■□□□□ 0.54
ECHDC1-214ENST00000474289 PABPN1LA6NDY0 278 aaKnown RBP18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 YJEFN3A6XGL0 299 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 TAF4O00268 1085 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 SOCS7O14512 581 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 SLC16A6O15403 523 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 CRCPO75575 148 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 NPPAP01160 153 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 SLC4A1P02730 911 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 FTH1P02794 183 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 GEMP55040 296 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 C9orf57Q5W0N0 161 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 PROKR1Q8TCW9 393 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 SNTG2Q9NY99 539 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 TMEFF2Q9UIK5 374 aaPredicted RBP18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 FAM234BA2RU67 622 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 CCL22O00626 93 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 PRKD3O94806 890 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 NPR3P17342 541 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 GRIK1P39086 918 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 LCP2Q13094 533 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 ZNF404Q494X3 552 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 KIAA0319Q5VV43 1072 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 LAIR1Q6GTX8 287 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 SCIMPQ6UWF3 145 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 LBX2Q6XYB7 198 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 AGMOQ6ZNB7 445 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 FBXO16Q8IX29 292 aaPredicted RBP18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 CELF2-AS1Q8N7Q2 184 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 COLEC11Q9BWP8 271 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 DCSTAMPQ9H295 470 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 KAT8Q9H7Z6 458 aaKnown RBP18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 ZBTB20Q9HC78 741 aaPredicted RBP18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 CRYL1Q9Y2S2 319 aa18.39■□□□□ 0.53
ECHDC1-214ENST00000474289 ZSWIM8A7E2V4 1837 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 EFCAB9A8MZ26 197 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 MT-ND2P03891 347 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 PRKCAP17252 672 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 ZBTB6Q15916 424 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 PCSK7Q16549 785 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 FBXO47Q5MNV8 452 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 TUBA3EQ6PEY2 450 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 SPATC1Q76KD6 591 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 NECAB2Q7Z6G3 386 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 METTL4Q8N3J2 472 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 DPP10Q8N608 796 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 ASCC1Q8N9N2 400 aaKnown RBP18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 SLC47A1Q96FL8 570 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 TKTL2Q9H0I9 626 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 MMP27Q9H306 513 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 H0Y626 953 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 TNPO2O14787 897 aaKnown RBP18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 KMOO15229 486 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 USP2O75604 605 aaPredicted RBP18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 TRIM16O95361 564 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 CYP11A1P05108 521 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 HLA-DQB2P05538 268 aa18.38■□□□□ 0.53
ECHDC1-214ENST00000474289 TGFBR2P37173 567 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms