RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PDE1BQ01064 536 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 PPP2R5EQ16537 467 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 LACTB2Q53H82 288 aaPredicted RBP13.27□□□□□ -0.29
CHD3-209ENST00000473376 SIRPB2Q5JXA9 342 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 ZNF648Q5T619 568 aaPredicted RBP13.27□□□□□ -0.29
CHD3-209ENST00000473376 SPOCD1Q6ZMY3 1216 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 RASGRP3Q8IV61 690 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 ABHD17AQ96GS6 310 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 MRGPRX2Q96LB1 330 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 LINC00615Q96LM1 132 aaPredicted RBP13.27□□□□□ -0.29
CHD3-209ENST00000473376 FERMT1Q9BQL6 677 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 ARFGAP3Q9NP61 516 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 ALG6Q9Y672 507 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 BSNQ9UPA5 3926 aa13.27□□□□□ -0.29
CHD3-209ENST00000473376 CLEC18AA5D8T8 446 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 C5orf60A6NFR6 353 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 TLCD2A6NGC4 264 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 OR52A4PA6NMU1 304 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 AGAP14A8MT82 685 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 MTX2O75431 263 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 CREG1O75629 220 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 ANXA9O76027 345 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 LCA5LO95447 670 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 MSL3P1P0C860 447 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 NDUFS1P28331 727 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 LEPRP48357 1165 aaKnown RBP13.26□□□□□ -0.29
CHD3-209ENST00000473376 DYNLT1P63172 113 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 HSD11B2P80365 405 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 KLRB1Q12918 225 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 DEFB109BQ30KR1 87 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 CLEC18BQ6UXF7 455 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 PID1Q7Z2X4 250 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 GLT6D1Q7Z4J2 308 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 UNC5BQ8IZJ1 945 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 RASGEF1AQ8N9B8 481 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 CLEC18CQ8NCF0 446 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 GDAP1Q8TB36 358 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 HEXDCQ8WVB3 486 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 THAP4Q8WY91 577 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 RSC1A1Q92681 617 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 RBM41Q96IZ5 413 aaKnown RBP13.26□□□□□ -0.29
CHD3-209ENST00000473376 LRFN5Q96NI6 719 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 TRIM4Q9C037 500 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 EPN3Q9H201 632 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 SYTL2Q9HCH5 934 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 LHX9Q9NQ69 397 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 LATS2Q9NRM7 1088 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 SPTLC3Q9NUV7 552 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 KLHL8Q9P2G9 620 aaPredicted RBP13.26□□□□□ -0.29
CHD3-209ENST00000473376 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
CHD3-209ENST00000473376 CROTQ9UKG9 612 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 RARRES3Q9UL19 164 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 WDR37Q9Y2I8 494 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 AAR2Q9Y312 384 aaKnown RBP13.26□□□□□ -0.29
CHD3-209ENST00000473376 MAST4O15021 2626 aa13.26□□□□□ -0.29
CHD3-209ENST00000473376 MGAT4DA6NG13 374 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 APOC4-APOC2K7ER74 178 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 MATN2O00339 956 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 KIAA0754O94854 1291 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 APOC2P02655 101 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 PRKAR1AP10644 381 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 ZNF28P17035 718 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 NFKB1P19838 968 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 F8A1P23610 371 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 CD97P48960 835 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 SEPHS1P49903 392 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 PMS2P54278 862 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 DRG2P55039 364 aaKnown RBP13.25□□□□□ -0.29
CHD3-209ENST00000473376 SH3BP2P78314 561 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 TAF1AQ15573 450 aaPredicted RBP13.25□□□□□ -0.29
CHD3-209ENST00000473376 CHRNA6Q15825 494 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 SEPT7Q16181 437 aaKnown RBP13.25□□□□□ -0.29
CHD3-209ENST00000473376 RPE65Q16518 533 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 BCL7AQ4VC05 210 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 GPRC6AQ5T6X5 926 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 ITPRIPL1Q6GPH6 555 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 C11orf63Q6NUN7 778 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 IRGCQ6NXR0 463 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 RANBP10Q6VN20 620 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 ZNF517Q6ZMY9 492 aaPredicted RBP13.25□□□□□ -0.29
CHD3-209ENST00000473376 BBS12Q6ZW61 710 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 ZNF567Q8N184 647 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 D2HGDHQ8N465 521 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 SIDT2Q8NBJ9 832 aaKnown RBP13.25□□□□□ -0.29
CHD3-209ENST00000473376 GALNT6Q8NCL4 622 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 OR2L2Q8NH16 312 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 ZNF398Q8TD17 642 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 OXNAD1Q96HP4 312 aaPredicted RBP13.25□□□□□ -0.29
CHD3-209ENST00000473376 QKIQ96PU8 341 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHD3-209ENST00000473376 CCM2Q9BSQ5 444 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 FSD1LQ9BXM9 530 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 BPIFA1Q9NP55 256 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 LUC7LQ9NQ29 371 aaKnown RBP13.25□□□□□ -0.29
CHD3-209ENST00000473376 UBP1Q9NZI7 540 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 HEBP2Q9Y5Z4 205 aa13.25□□□□□ -0.29
CHD3-209ENST00000473376 HECTD1Q9ULT8 2610 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 hCG_1818297A0A087WSY0 165 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 C17orf113A0A1B0GUU1 675 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 OR5K3A6NET4 321 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 C2orf81A6NN90 581 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms