RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TRIM58Q8NG06 486 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 DNAJC1Q96KC8 554 aaKnown RBP22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 TAAR9Q96RI9 348 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 CPNE5Q9HCH3 593 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 FOXJ2Q9P0K8 574 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 WDR37Q9Y2I8 494 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 SLC30A1Q9Y6M5 507 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 CACNA1GO43497 2377 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 ERI2A8K979 691 aaKnown RBP22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 IFNB1P01574 187 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 LIPCP11150 499 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 RALBP11234 206 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 TPH1P17752 444 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 CD82P27701 267 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 PBLDP30039 288 aaPredicted RBP22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 FDFT1P37268 417 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 SEPT6Q14141 434 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 NFE2L1Q14494 772 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 POU6F1Q14863 301 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 CLCA4Q14CN2 919 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 BCL7AQ4VC05 210 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 SNAP47Q5SQN1 464 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 FAM83HQ6ZRV2 1179 aaPredicted RBP22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 ARHGAP22Q7Z5H3 698 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 NXPE1Q8N323 547 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 BEND7Q8N7W2 519 aaPredicted RBP22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 SGF29Q96ES7 293 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 DCUN1D1Q96GG9 259 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 SLC40A1Q9NP59 571 aa22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 NLE1Q9NVX2 485 aaPredicted RBP22.12■■□□□ 1.13
PTP4A1-203ENST00000473334 MN1Q10571 1320 aaPredicted RBP22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 TEX51A0A1B0GUA7 166 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 KLHL33A6NCF5 533 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 A8MU76 341 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 H7C0S8 307 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 CCL22O00626 93 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 UBXN7O94888 489 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 MC4RP32245 332 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 SNX1Q13596 522 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 GPR33Q49SQ1 333 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 FAM129CQ86XR2 697 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 PLXDC1Q8IUK5 500 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 STYXQ8WUJ0 223 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 HEXDCQ8WVB3 486 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 UBL7Q96S82 380 aaPredicted RBP22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 COPS8Q99627 209 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 ETNK1Q9HBU6 452 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 PIH1D1Q9NWS0 290 aaKnown RBP22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 OGFRQ9NZT2 677 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 PPP2R2CQ9Y2T4 447 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 PCDHGA3Q9Y5H0 932 aa22.11■■□□□ 1.13
PTP4A1-203ENST00000473334 MGAT4DA6NG13 374 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 EFCAB7A8K855 629 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 B4E171 279 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 CFAP99D6REC4 459 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 TYRP1P17643 537 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 AMD1P17707 334 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 TSPAN7P41732 249 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 VAC14Q08AM6 782 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 GPR18Q14330 331 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 SIX1Q15475 284 aaPredicted RBP22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 CCNG2Q16589 344 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 SOWAHCQ53LP3 525 aaPredicted RBP22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 ARHGAP40Q5TG30 622 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 METRNLQ641Q3 311 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 ZFAND4Q86XD8 727 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 OR52K1Q8NGK4 314 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 OR2L2Q8NH16 312 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 ART4Q93070 314 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 LINC00615Q96LM1 132 aaPredicted RBP22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 CCNL2Q96S94 520 aaPredicted RBP22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 DDA1Q9BW61 102 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 TLR10Q9BXR5 811 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 FAM96AQ9H5X1 160 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 WDR70Q9NW82 654 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 OCIAD1Q9NX40 245 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 KLHL3Q9UH77 587 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 PSMD13Q9UNM6 376 aa22.1■■□□□ 1.13
PTP4A1-203ENST00000473334 AHCTF1Q8WYP5 2266 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 TRBV5-4A0A0C4DH59 114 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 SGTAO43765 313 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 SUN1O94901 812 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 LMAN1P49257 510 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 RAB15P59190 212 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 CDH17Q12864 832 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 TGIF1Q15583 401 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 RPE65Q16518 533 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 ZRANB3Q5FWF4 1079 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 BMPERQ8N8U9 685 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 CCDC89Q8N998 374 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 DNAAF3Q8N9W5 541 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 GPR150Q8NGU9 434 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 NAT14Q8WUY8 206 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 SNRNP27Q8WVK2 155 aaKnown RBP22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 MAIP1Q8WWC4 291 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 SLC39A1Q9NY26 324 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 ZDHHC3Q9NYG2 299 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 PAK5Q9P286 719 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 ZKSCAN5Q9Y2L8 839 aa22.09■■□□□ 1.13
PTP4A1-203ENST00000473334 MGAQ8IWI9 3026 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms