RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ISCUQ9H1K1 167 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 OSGEPL1Q9H4B0 414 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 ASF1BQ9NVP2 202 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 AIPL1Q9NZN9 384 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 ITGB1BP2Q9UKP3 347 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 SHOC2Q9UQ13 582 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 POLEQ07864 2286 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 HEATR9A2RTY3 570 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 SLC25A14O95258 325 aaPredicted RBP9.13□□□□□ -0.95
VCL-204ENST00000472585 CAPN1P07384 714 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 EBLN1P0CF75 366 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 SLC2A4P14672 509 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 CCNCP24863 283 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 PTPN4P29074 926 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 PRKCIP41743 596 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 CD86P42081 329 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 PTGIRP43119 386 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 ZNF165P49910 485 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 RPL26P61254 145 aaKnown RBP9.13□□□□□ -0.95
VCL-204ENST00000472585 PDE1BQ01064 536 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 GBE1Q04446 702 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 CDK18Q07002 472 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 ZBTB17Q13105 803 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 GPS2Q13227 327 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 DPYSL3Q14195 570 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 GALNT3Q14435 633 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 IRGCQ6NXR0 463 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 FBXO38Q6PIJ6 1188 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 TMC3Q7Z5M5 1100 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 SYVN1Q86TM6 617 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 PPP1R3BQ86XI6 285 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 PHYKPLQ8IUZ5 450 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 NDUFAF2Q8N183 169 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 GPR150Q8NGU9 434 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 NSMCE1Q8WV22 266 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 TEKT4Q8WW24 435 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 GLYATL1Q969I3 302 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 SNRNP40Q96DI7 357 aaKnown RBP9.13□□□□□ -0.95
VCL-204ENST00000472585 RANBP9Q96S59 729 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 NRTNQ99748 197 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 MAP3K3Q99759 626 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 MLPHQ9BV36 600 aaPredicted RBP9.13□□□□□ -0.95
VCL-204ENST00000472585 NUDT9Q9BW91 350 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 SPATA16Q9BXB7 569 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 RAB33BQ9H082 229 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 LMBRD1Q9NUN5 540 aa9.13□□□□□ -0.95
VCL-204ENST00000472585 RPL26L1Q9UNX3 145 aaKnown RBP9.13□□□□□ -0.95
VCL-204ENST00000472585 RGSL1A5PLK6 1076 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 A6NL46 340 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 PDZK1P1A8MUH7 402 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 PRSS44E7EML9 344 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 KCNK1O00180 336 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 ZNF185O15231 689 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 DDX3YO15523 660 aaKnown RBP9.12□□□□□ -0.95
VCL-204ENST00000472585 LCA5LO95447 670 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 JCHAINP01591 159 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 CD46P15529 392 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 BPIP17213 487 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 DESP17661 470 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 LPOP22079 712 aaPredicted RBP9.12□□□□□ -0.95
VCL-204ENST00000472585 CES1P23141 567 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 ITGA1P56199 1179 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 TAS2R40P59535 323 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 TUBB3Q13509 450 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 GPR19Q15760 415 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 INSCQ1MX18 579 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 PLEKHN1Q494U1 663 aaPredicted RBP9.12□□□□□ -0.95
VCL-204ENST00000472585 AGAP9Q5VTM2 703 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 HGSNATQ68CP4 663 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 WASH2PQ6VEQ5 465 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 FAM83HQ6ZRV2 1179 aaPredicted RBP9.12□□□□□ -0.95
VCL-204ENST00000472585 ZGRF1Q86YA3 2104 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 LRRC49Q8IUZ0 686 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 TMEM151BQ8IW70 566 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 CISD2Q8N5K1 135 aaKnown RBP9.12□□□□□ -0.95
VCL-204ENST00000472585 NIPA2Q8N8Q9 360 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 AVL9Q8NBF6 648 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 FDCSPQ8NFU4 85 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 FATE1Q969F0 183 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 TADA1Q96BN2 335 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 NUP85Q9BW27 656 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 CEP41Q9BYV8 373 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 CHST8Q9H2A9 424 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 ZFYVE1Q9HBF4 777 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 SLC24A3Q9HC58 644 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 PDE7BQ9NP56 450 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 WASH6PQ9NQA3 447 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 GPR83Q9NYM4 423 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 PKD2L2Q9NZM6 624 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 MYO6Q9UM54 1294 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 FARSAQ9Y285 508 aaKnown RBP9.12□□□□□ -0.95
VCL-204ENST00000472585 TTLL3Q9Y4R7 772 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 SPO11Q9Y5K1 396 aa9.12□□□□□ -0.95
VCL-204ENST00000472585 FER1L5A0AVI2 2057 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 SSU72P8A0A1W2PR75 194 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 MASP2O00187 686 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 KMOO15229 486 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 GPR39O43194 453 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 LRRTM2O43300 516 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 CDK14O94921 469 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms