RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SLC38A9Q8NBW4 561 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 GPR26Q8NDV2 337 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 OR8K5Q8NH50 307 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 GDAP1Q8TB36 358 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 CPT1BQ92523 772 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 ADGRE3Q9BY15 652 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 SLC7A5P2Q9GIP4 190 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 FANCEQ9HB96 536 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 SEMA5BQ9P283 1151 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 MYO1AQ9UBC5 1043 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 WDR37Q9Y2I8 494 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 F8P00451 2351 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 SPTBP11277 2137 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 MATN3O15232 486 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 DDX3YO15523 660 aaKnown RBP18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 VEGFDO43915 354 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 RARAP10276 462 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 OTX2P32243 289 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 PCK1P35558 622 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 NIPAL4Q0D2K0 466 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 GTF2H3Q13889 308 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 PLEKHS1Q5SXH7 462 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 RAB43Q86YS6 212 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 MCEMP1Q8IX19 187 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 DSELQ8IZU8 1212 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 TRAM1L1Q8N609 369 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 CD180Q99467 661 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 NUP85Q9BW27 656 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 AGPAT4Q9NRZ5 378 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 RAD18Q9NS91 495 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 HRASLS2Q9NWW9 162 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 TMEM63CQ9P1W3 806 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 PSMD13Q9UNM6 376 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 SHOC2Q9UQ13 582 aa18.54■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZBTB11O95625 1053 aaPredicted RBP18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 FTLP02792 175 aaPredicted RBP18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 TCF4P15884 667 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 CD86P42081 329 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 UBXN1Q04323 297 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 GALNT3Q14435 633 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 ALG1LQ6GMV1 187 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZNF517Q6ZMY9 492 aaPredicted RBP18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZC3H18Q86VM9 953 aaKnown RBP18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZNF547Q8IVP9 402 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 ANKRD20A12PQ8NF67 263 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 GPR150Q8NGU9 434 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 ARRDC2Q8TBH0 407 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZNF501Q96CX3 271 aaPredicted RBP18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 TTC25Q96NG3 672 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 PCDH18Q9HCL0 1135 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 OSGIN2Q9Y236 505 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 SCINQ9Y6U3 715 aa18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 SETD2Q9BYW2 2564 aaPredicted RBP18.53■□□□□ 0.56
NCKIPSD-209ENST00000470006 PRSS44E7EML9 344 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 MFSD11O43934 449 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 HLA-DQB2P05538 268 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 PIRTP0C851 137 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 ATXN8OSP0DMR3 200 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 PDPK2PQ6A1A2 396 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 OOSP2Q86WS3 158 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZADH2Q8N4Q0 377 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 CLEC1AQ8NC01 280 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 LRRN4Q8WUT4 740 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 UBE2Q2Q8WVN8 375 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 TM9SF4Q92544 642 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 MAML1Q92585 1016 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 EID2BQ96D98 161 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 LRFN5Q96NI6 719 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 GPR63Q9BZJ6 419 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 CLSTN2Q9H4D0 955 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 AMACRQ9UHK6 382 aa18.52■□□□□ 0.56
NCKIPSD-209ENST00000470006 POLEQ07864 2286 aa18.52■□□□□ 0.55
NCKIPSD-209ENST00000470006 OR5K3A6NET4 321 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 C9J4A7 227 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 SSR1P43307 286 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 ARCN1P48444 511 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 MMRN1Q13201 1228 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 LLGL1Q15334 1064 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 RPE65Q16518 533 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 IFI16Q16666 785 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 CDKAL1Q5VV42 579 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 FBXO38Q6PIJ6 1188 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 SYTL1Q8IYJ3 562 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 ST6GALNAC3Q8NDV1 305 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 TLR10Q9BXR5 811 aa18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 ACTR5Q9H9F9 607 aaPredicted RBP18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 MRPL47Q9HD33 250 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 IMP3Q9NV31 184 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-209ENST00000470006 KLHL41O60662 606 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 LCA5LO95447 670 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 CYP2A7P20853 494 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 CCNCP24863 283 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 DCDC1P59894 354 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 GALNT2Q10471 571 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 TMEM115Q12893 351 aaPredicted RBP18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 XRCC4Q13426 336 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 ZRSR2Q15696 482 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 PTCHD3Q3KNS1 767 aa18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 KHDC1Q4VXA5 237 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-209ENST00000470006 CT47A1Q5JQC4 288 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms