RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 ACP1P24666 158 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 DMPKQ09013 629 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 THOC5Q13769 683 aaKnown RBP11.75□□□□□ -0.53
VPS13D-204ENST00000469054 SMAD1Q15797 465 aaKnown RBP11.75□□□□□ -0.53
VPS13D-204ENST00000469054 TYSND1Q2T9J0 566 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PPM1JQ5JR12 505 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 UNC5AQ6ZN44 842 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 DGLUCYQ7Z3D6 616 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 C17orf82Q86X59 251 aaPredicted RBP11.75□□□□□ -0.53
VPS13D-204ENST00000469054 CILP2Q8IUL8 1156 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 ANKMY2Q8IV38 441 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 SFTPA2Q8IWL1 248 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 ZBED8Q8IZ13 594 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 NAGSQ8N159 534 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 KYQ8NBH2 561 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 FBXO36Q8NEA4 188 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 OR2L2Q8NH16 312 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 CALML6Q8TD86 181 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 TCF12Q99081 682 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 FOXP3Q9BZS1 431 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PHACTR1Q9C0D0 580 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 OSGEPL1Q9H4B0 414 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 VPS37BQ9H9H4 285 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PLAC1Q9HBJ0 212 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PRDM8Q9NQV8 689 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 FAM114A2Q9NRY5 505 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PADI4Q9UM07 663 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PCDHGA1Q9Y5H4 931 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 LAMA1P25391 3075 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 A6NCN8 305 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 OR5K4A6NMS3 321 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 F8W8V4 182 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 PRMT5O14744 637 aaPredicted RBP11.74□□□□□ -0.53
VPS13D-204ENST00000469054 NDUFS3O75489 264 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 EML2O95834 649 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 GSTM1P09488 218 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 OR56A5P0C7T3 313 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 F3P13726 295 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 IDSP22304 550 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 PBLDP30039 288 aaPredicted RBP11.74□□□□□ -0.53
VPS13D-204ENST00000469054 ACADVLP49748 655 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 GSTM4Q03013 218 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 ILKQ13418 452 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 NFE2L1Q14494 772 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 HLTFQ14527 1009 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS13D-204ENST00000469054 FASTKD3Q14CZ7 662 aaKnown RBP11.74□□□□□ -0.53
VPS13D-204ENST00000469054 C14orf28Q4W4Y0 310 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 HSP90AA5PQ58FG0 334 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 RNF187Q5TA31 235 aaPredicted RBP11.74□□□□□ -0.53
VPS13D-204ENST00000469054 STEAP4Q687X5 459 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 IYDQ6PHW0 289 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 ABRAXAS1Q6UWZ7 409 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 WASH2PQ6VEQ5 465 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 FAM83HQ6ZRV2 1179 aaPredicted RBP11.74□□□□□ -0.53
VPS13D-204ENST00000469054 SLCO6A1Q86UG4 719 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 KCNMB4Q86W47 210 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 LMNTD2Q8IXW0 634 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 UNC5BQ8IZJ1 945 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 ARL14Q8N4G2 192 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 LRRN4CLQ8ND94 238 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 OR6C4Q8NGE1 309 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 PYROXD1Q8WU10 500 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 PATE1Q8WXA2 126 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 NAT6Q93015 286 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 CFAP36Q96G28 342 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 CCM2Q9BSQ5 444 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 FAM129AQ9BZQ8 928 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 SAYSD1Q9NPB0 183 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 WASH6PQ9NQA3 447 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 ZDHHC18Q9NUE0 388 aa11.74□□□□□ -0.53
VPS13D-204ENST00000469054 TRBV23OR9-2A0A075B6M9 112 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 CPED1A4D0V7 1026 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 PDZK1P1A8MUH7 402 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 RFPL3O75679 317 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 DKK1O94907 266 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 S1PR4O95977 384 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 FTH1P19P0C7X4 201 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 ERVK-10P10266 1014 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 SLC2A4P14672 509 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 GLB1P16278 677 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 RPS3P23396 243 aaKnown RBP eCLIP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 RPL10P27635 214 aaKnown RBP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 ADARP55265 1226 aaKnown RBP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 MAZP56270 477 aaKnown RBP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 CTBP1Q13363 440 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 FRG1Q14331 258 aaKnown RBP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 SEPT7Q16181 437 aaKnown RBP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 METRNLQ641Q3 311 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 ZNF470Q6ECI4 717 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 GUSBP11Q6P575 273 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 EFL1Q7Z2Z2 1120 aaKnown RBP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 LRRC6Q86X45 466 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 DENND6AQ8IWF6 608 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 CFAP206Q8IYR0 622 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 GABPB2Q8TAK5 448 aaPredicted RBP11.73□□□□□ -0.53
VPS13D-204ENST00000469054 GSDMBQ8TAX9 411 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 IFI44Q8TCB0 444 aa11.73□□□□□ -0.53
VPS13D-204ENST00000469054 HM13Q8TCT9 377 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms