RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 A8MU76 341 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 TOX3O15405 576 aaPredicted RBP18.74■□□□□ 0.59
COL7A1-207ENST00000467985 ARHGAP6O43182 974 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 EFSO43281 561 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 POP7O75817 140 aaKnown RBP18.74■□□□□ 0.59
COL7A1-207ENST00000467985 ANKRD34CP0C6C1 535 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 BRAFP15056 766 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 AKT1P31749 480 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 DRG2P55039 364 aaKnown RBP18.74■□□□□ 0.59
COL7A1-207ENST00000467985 MC2RQ01718 297 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 TMEM220Q6QAJ8 160 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 CEACAM20Q6UY09 585 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 BMPERQ8N8U9 685 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 OR4K2Q8NGD2 314 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 TBL1YQ9BQ87 522 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 APOL2Q9BQE5 337 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 DESI2Q9BSY9 194 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 B3GALT1Q9Y5Z6 326 aa18.74■□□□□ 0.59
COL7A1-207ENST00000467985 SRP72O76094 671 aaKnown RBP18.73■□□□□ 0.59
COL7A1-207ENST00000467985 FTCDO95954 541 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 C9P02748 559 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 AMD1P17707 334 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 HADHAP40939 763 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 KLF1Q13351 362 aaPredicted RBP18.73■□□□□ 0.59
COL7A1-207ENST00000467985 PARP6Q2NL67 630 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 P3H1Q32P28 736 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 KIAA1614Q5VZ46 1190 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 KLHDC8BQ8IXV7 354 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 ULK4Q96C45 1275 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 HES6Q96HZ4 224 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 TSGA10Q9BZW7 698 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 ASB8Q9H765 288 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 TRIM10Q9UDY6 481 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 PACSIN2Q9UNF0 486 aaPredicted RBP18.73■□□□□ 0.59
COL7A1-207ENST00000467985 SDK2Q58EX2 2172 aa18.73■□□□□ 0.59
COL7A1-207ENST00000467985 OR2AG2A6NM03 316 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 OR52A4PA6NMU1 304 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 DDX3YO15523 660 aaKnown RBP18.72■□□□□ 0.59
COL7A1-207ENST00000467985 GPR39O43194 453 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 PRB1P04280 392 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 ITGB2P05107 769 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 RALBP11234 206 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 ARSDP51689 593 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 CTSCP53634 463 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 GPR18Q14330 331 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 PTPRCAPQ14761 206 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 ANKS6Q68DC2 871 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 XKR5Q6UX68 686 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 VASH2Q86V25 355 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 BEND7Q8N7W2 519 aaPredicted RBP18.72■□□□□ 0.59
COL7A1-207ENST00000467985 FAM71DQ8N9W8 422 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 HEXDCQ8WVB3 486 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 NKD1Q969G9 470 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 PMEPA1Q969W9 287 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 C9orf72Q96LT7 481 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 LRRC40Q9H9A6 602 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 OGFRQ9NZT2 677 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 KLHL3Q9UH77 587 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 FKBPLQ9UIM3 349 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 PCDHGA4Q9Y5G9 962 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 SLC30A1Q9Y6M5 507 aa18.72■□□□□ 0.59
COL7A1-207ENST00000467985 PSMD3O43242 534 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 TYRP1P17643 537 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 CAPZBP47756 277 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 ZNF140P52738 457 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-207ENST00000467985 CCZ1BP86790 482 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 CCZ1P86791 482 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-207ENST00000467985 MSLNQ13421 630 aaPredicted RBP18.71■□□□□ 0.59
COL7A1-207ENST00000467985 OLIG2Q13516 323 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 CLCA4Q14CN2 919 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 FNBP1LQ5T0N5 605 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 METRNLQ641Q3 311 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 DENND5AQ6IQ26 1287 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 KLHL35Q6PF15 583 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 IL22RA1Q8N6P7 574 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 DCUN1D1Q96GG9 259 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 ZDHHC12Q96GR4 267 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 EPHA6Q9UF33 1036 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 ACSL5Q9ULC5 683 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 WDR37Q9Y2I8 494 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 KCTD3Q9Y597 815 aa18.71■□□□□ 0.59
COL7A1-207ENST00000467985 MGAT4DA6NG13 374 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 AGAP14A8MT82 685 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 CFAP99D6REC4 459 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 POLR1CO15160 346 aaPredicted RBP18.7■□□□□ 0.58
COL7A1-207ENST00000467985 CAPN5O15484 640 aaPredicted RBP18.7■□□□□ 0.58
COL7A1-207ENST00000467985 KRT86O43790 486 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 C1QL1O75973 258 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 ITGALP20701 1170 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 CA5AP35218 305 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 GFERP55789 205 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 XIAPP98170 497 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 RPE65Q16518 533 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 GPR33Q49SQ1 333 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 BCL7AQ4VC05 210 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 KCTD11Q693B1 232 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 CACNA2D3Q8IZS8 1091 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 ZNF843Q8N446 348 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 SLC35B2Q8TB61 432 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 TRIM44Q96DX7 344 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms