RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SEMA4BQ9NPR2 832 aaPredicted RBP21.45■■□□□ 1.02
PDLIM2-216ENST00000464275 SLC27A6Q9Y2P4 619 aa21.45■■□□□ 1.02
PDLIM2-216ENST00000464275 DNAJC15Q9Y5T4 150 aa21.45■■□□□ 1.02
PDLIM2-216ENST00000464275 PRRC2BQ5JSZ5 2229 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-216ENST00000464275 LEFTY1O75610 366 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 AGTR2P50052 363 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 IRX1P78414 480 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 TBL3Q12788 808 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 CDC16Q13042 620 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 ARSIQ5FYB1 569 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 GPRC6AQ5T6X5 926 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 TWIST2Q8WVJ9 160 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 LRIG1Q96JA1 1093 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 COPS8Q99627 209 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 FAM192AQ9GZU8 254 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 IL36AQ9UHA7 158 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 POMPQ9Y244 141 aa21.44■■□□□ 1.02
PDLIM2-216ENST00000464275 PEX1O43933 1283 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 S100BP04271 92 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 VIPR2P41587 438 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 NRIP1P48552 1158 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 ATP4BP51164 291 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 CCNIQ14094 377 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 ATP13A5Q4VNC0 1218 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 TCEAL5Q5H9L2 206 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 OR52E8Q6IFG1 317 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 SBSNQ6UWP8 590 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 OR56A4Q8NGH8 313 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 BPIFB1Q8TDL5 484 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 HCAR2Q8TDS4 363 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 FAM126AQ9BYI3 521 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 LMAN2LQ9H0V9 348 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 KLHL42Q9P2K6 505 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 YBX2Q9Y2T7 364 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 AIM2O14862 343 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 RAD51BO15315 384 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 CD1EP15812 388 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 MAPRE2Q15555 327 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 PPP1R3AQ16821 1122 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 TTLL9Q3SXZ7 439 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 LRRC73Q5JTD7 316 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 RFLNAQ6ZTI6 216 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 EFL1Q7Z2Z2 1120 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 KYQ8NBH2 561 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 UCMAQ8WVF2 138 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 HGH1Q9BTY7 390 aa21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 NUSAP1Q9BXS6 441 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 TNPO3Q9Y5L0 923 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-216ENST00000464275 LRRK1Q38SD2 2015 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 IGLV3-16A0A075B6K0 115 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 UPK3BL1B0FP48 263 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 UPK3BL2E5RIL1 263 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 CASQ2O14958 399 aaPredicted RBP21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 CRCPO75575 148 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 NFATC1O95644 943 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 NUDT2P50583 147 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 FOXA1P55317 472 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 ST8SIA6P61647 398 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 PCBP2Q15366 365 aaKnown RBP eCLIP21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 SHHQ15465 462 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 FBXO48Q5FWF7 155 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 FAM78AQ5JUQ0 283 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 C12orf40Q86WS4 652 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 TMEM126BQ8IUX1 230 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 NPAS3Q8IXF0 933 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 SLC26A7Q8TE54 656 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 CERS4Q9HA82 394 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 KCTD5Q9NXV2 234 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 DKK3Q9UBP4 350 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 OARD1Q9Y530 152 aa21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 MUC22E2RYF6 1773 aaPredicted RBP21.42■■□□□ 1.02
PDLIM2-216ENST00000464275 E2F3O00716 465 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 PIP5K1BO14986 540 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 TULP3O75386 442 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 ESRRBO95718 433 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 CBSLP0DN79 551 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 TIMP2P16035 220 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 CBSP35520 551 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 RBBP7Q16576 425 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 ZNF805Q5CZA5 627 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 PDSS2Q86YH6 399 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 PIP4K2CQ8TBX8 421 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 NAT14Q8WUY8 206 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 SMARCD2Q92925 531 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 RCN3Q96D15 328 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 C3orf30Q96M34 536 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 ASB16Q96NS5 453 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 KCNA7Q96RP8 456 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 KLHL4Q9C0H6 718 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 EFCAB1Q9HAE3 211 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 RAD18Q9NS91 495 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 UTP6Q9NYH9 597 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 EIF2B4Q9UI10 523 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 TCF20Q9UGU0 1960 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 VPS4BO75351 444 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 CTSLP07711 333 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 FSHRP23945 695 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 PTK2BQ14289 1009 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 ETFBKMTQ8IXQ9 262 aa21.41■■□□□ 1.02
PDLIM2-216ENST00000464275 PDPRQ8NCN5 879 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms