RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 QDPRP09417 244 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 HSPA1AP0DMV8 641 aaKnown RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 HSPA1BP0DMV9 641 aaKnown RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 UBL4AP11441 157 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 IFNAR1P17181 557 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 ALDH4A1P30038 563 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 PSMC2P35998 433 aaKnown RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 MSH2P43246 934 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 RPS3AP61247 264 aaKnown RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 RBP5P82980 135 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 AIMP1Q12904 312 aaKnown RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 GAGE5Q13069 117 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 GAGE6Q13070 117 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 PPIGQ13427 754 aaKnown RBP eCLIP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 DCTN2Q13561 401 aaKnown RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 TDGQ13569 410 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 COG2Q14746 738 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 STXBP5Q5T5C0 1151 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 RAB12Q6IQ22 244 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 LCTLQ6UWM7 567 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 CEACAM20Q6UY09 585 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 IKBIPQ70UQ0 350 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 NUP54Q7Z3B4 507 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 SLFN11Q7Z7L1 901 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 SCML4Q8N228 414 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 TRIML1Q8N9V2 468 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 OR2AK2Q8NG84 335 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 OR10V1Q8NGI7 309 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 MOSPD2Q8NHP6 518 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 GDAP1Q8TB36 358 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 LGALS12Q96DT0 336 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 LITAFQ99732 161 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 H2AFJQ9BTM1 129 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 POLR3CQ9BUI4 534 aaPredicted RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 HEMGNQ9BXL5 484 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 COQ3Q9NZJ6 369 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 C5AR2Q9P296 337 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 CHORDC1Q9UHD1 332 aaPredicted RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 DLGAP4Q9Y2H0 992 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 RRP15Q9Y3B9 282 aaKnown RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 OR2W1Q9Y3N9 320 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 MPHOSPH10O00566 681 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 PCDH7O60245 1069 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 FMO6PO60774 539 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 SLU7O95391 586 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 INHBAP08476 426 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 TM4SF1P30408 202 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 TLX1P31314 330 aaPredicted RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 EIF2DP41214 584 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 PAFAH1B1P43034 410 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 GABRB2P47870 512 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 HARS2P49590 506 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 EVCP57679 992 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 POLR2FP61218 127 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ISL1P61371 349 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 RPP30P78346 268 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 SORDQ00796 357 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 EPS8Q12929 822 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 BFSP1Q12934 665 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF234Q14588 700 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 RNPS1Q15287 305 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 E2F5Q15329 346 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ADIPOQQ15848 244 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 KYNUQ16719 465 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF674Q2M3X9 581 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF876PQ49A33 203 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 SIRPB2Q5JXA9 342 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 TTI2Q6NXR4 508 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 SLC27A1Q6PCB7 646 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 IYDQ6PHW0 289 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 MYPOPQ86VE0 399 aaPredicted RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF248Q8NDW4 579 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 KLHDC9Q8NEP7 349 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 DBF4BQ8NFT6 615 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 CADM4Q8NFZ8 388 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 METTL6Q8TCB7 284 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 UTP15Q8TED0 518 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 PIGTQ969N2 578 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 RBM18Q96H35 190 aaKnown RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 C17orf77Q96MU5 243 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 NEURL2Q9BR09 285 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ANP32EQ9BTT0 268 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 HGH1Q9BTY7 390 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 SLC25A18Q9H1K4 315 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 RABEP2Q9H5N1 569 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 HSPB7Q9UBY9 170 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 AGTPBP1Q9UPW5 1226 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 MTF2Q9Y483 593 aaPredicted RBP3.95□□□□□ -1.78
ITGB1-208ENST00000464001 ATP6V0A2Q9Y487 856 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 FAM169AQ9Y6X4 670 aa3.95□□□□□ -1.78
ITGB1-208ENST00000464001 COL2A1P02458 1487 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 A8MV72 311 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 TAF4O00268 1085 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 SEC14L5O43304 696 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 GUCA1CO95843 209 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 KRT5P13647 590 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 P4HA1P13674 534 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 EPHA8P29322 1005 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 GCH1P30793 250 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 GARSP41250 739 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms