RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	IDS	P22304	550 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	PTPN3	P26045	913 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	PTPN4	P29074	926 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	PRKD1	Q15139	912 aa	Predicted RBP	10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	PCSK7	Q16549	785 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	NADK2	Q4G0N4	442 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	LCN10	Q6JVE6	187 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	B4GALNT4	Q76KP1	1039 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	ATCAY	Q86WG3	371 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	D2HGDH	Q8N465	521 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	RASGEF1A	Q8N9B8	481 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815		Q8NA96	180 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	GALNT11	Q8NCW6	608 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	DDHD1	Q8NEL9	900 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	UBXN4	Q92575	508 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	ZNF501	Q96CX3	271 aa	Predicted RBP	10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	CXorf40B	Q96DE9	158 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	ZNF514	Q96K75	400 aa	Predicted RBP	10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	AGAP3	Q96P47	875 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	MAP3K3	Q99759	626 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	GPR87	Q9BY21	358 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	GPR63	Q9BZJ6	419 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	XPO4	Q9C0E2	1151 aa	Known RBP	10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	GLOD4	Q9HC38	313 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	BPIFA1	Q9NP55	256 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	IL17C	Q9P0M4	197 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	CTTNBP2NL	Q9P2B4	639 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	TRIM10	Q9UDY6	481 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	MAP4K5	Q9Y4K4	846 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	HEY1	Q9Y5J3	304 aa		10.92	□□□□□ -0.66
PTPN7-204	ENST00000462815	DOPEY1	Q5JWR5	2465 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	OR5K3	A6NET4	321 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	SGTA	O43765	313 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	SEMA7A	O75326	666 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	SERPINC1	P01008	464 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	CAPN1	P07384	714 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	CCNYL3	P0C7X3	344 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	CASP14	P31944	242 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	FANCC	Q00597	558 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	AP1B1	Q10567	949 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	WASHC5	Q12768	1159 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	CHAF1B	Q13112	559 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	GPS2	Q13227	327 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	NFE2L1	Q14494	772 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	TAZ	Q16635	292 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	TEX44	Q53QW1	395 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	ZNF789	Q5FWF6	425 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	IZUMO3	Q5VZ72	239 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	SYVN1	Q86TM6	617 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	KMT5C	Q86Y97	462 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	TRAPPC5	Q8IUR0	188 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	SIDT2	Q8NBJ9	832 aa	Known RBP	10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	THAP4	Q8WY91	577 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	TEKT5	Q96M29	485 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	PPM1M	Q96MI6	270 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	ZNF830	Q96NB3	372 aa	Predicted RBP	10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	CBX8	Q9HC52	389 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	PDE7B	Q9NP56	450 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	FGF21	Q9NSA1	209 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	RARRES3	Q9UL19	164 aa		10.91	□□□□□ -0.66
PTPN7-204	ENST00000462815	SYCE3	A1L190	88 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	LRRD1	A4D1F6	860 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	TLCD2	A6NGC4	264 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	UGT1A9	O60656	530 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	KCNJ13	O60928	360 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	POP7	O75817	140 aa	Known RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	H2AFZ	P0C0S5	128 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	TMEM253	P0C7T8	217 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	MTHFD1	P11586	935 aa	Known RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	UGT1A6	P19224	532 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	LPO	P22079	712 aa	Predicted RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	UGT1A1	P22309	533 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	UGT1A4	P22310	534 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	RORA	P35398	523 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	CHRNA4	P43681	627 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	ACY1	Q03154	408 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	ABR	Q12979	859 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	PDK1	Q15118	436 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	CHRNA6	Q15825	494 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	SLC18A3	Q16572	532 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	PRR30	Q53SZ7	412 aa	Predicted RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	SIRPB2	Q5JXA9	342 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	PRAMEF17	Q5VTA0	474 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	METRNL	Q641Q3	311 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	DUS1L	Q6P1R4	473 aa	Known RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	CYB5D1	Q6P9G0	228 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	H2AFV	Q71UI9	128 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	AMZ2	Q86W34	360 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	BPHL	Q86WA6	291 aa	Predicted RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	CPT1C	Q8TCG5	803 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	BRSK1	Q8TDC3	778 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	CPLX3	Q8WVH0	158 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	OXNAD1	Q96HP4	312 aa	Predicted RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	MRGPRX2	Q96LB1	330 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	LRFN5	Q96NI6	719 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	INSM2	Q96T92	566 aa	Predicted RBP	10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	CD180	Q99467	661 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	GORASP1	Q9BQQ3	440 aa		10.9	□□□□□ -0.66

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