RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 NFIL3Q16649 462 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 GEN1Q17RS7 908 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ITPRIPL2Q3MIP1 535 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 YIF1BQ5BJH7 314 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 BRMS1LQ5PSV4 323 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 RTP2Q5QGT7 225 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 RNASEH2BQ5TBB1 312 aaKnown RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 FAM171A1Q5VUB5 890 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 PARM1Q6UWI2 310 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ARHGAP36Q6ZRI8 547 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 SYT13Q7L8C5 426 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 DPH6Q7L8W6 267 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 IRF2BP2Q7Z5L9 587 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 POLNQ7Z5Q5 900 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 CPNE8Q86YQ8 564 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 GLYCTKQ8IVS8 523 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 YAF2Q8IY57 180 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 DCP1BQ8IZD4 617 aaKnown RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 DSELQ8IZU8 1212 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 UBL4BQ8N7F7 174 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ELMO1Q92556 727 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 USP13Q92995 863 aaPredicted RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 VPS39Q96JC1 886 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 TEKT5Q96M29 485 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 KCNK16Q96T55 309 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 MLPHQ9BV36 600 aaPredicted RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 MINDY3Q9H8M7 445 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 SEMA4GQ9NTN9 838 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 SLC39A1Q9NY26 324 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 AP4E1Q9UPM8 1137 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 PRSS47A8MTI9 375 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 TRIM49D1C9J1S8 452 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 AGRPO00253 132 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 CLDN3O15551 220 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 HTRA2O43464 458 aaPredicted RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 APBB3O95704 486 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 NDST3O95803 873 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ITGB3P05106 788 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 FCER2P06734 321 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 CKMT2P17540 419 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 NCF2P19878 526 aaPredicted RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 LEPRP48357 1165 aaKnown RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 LSM3P62310 102 aaKnown RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 SNRPD2P62316 118 aaKnown RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 GPC5P78333 572 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ROR1Q01973 937 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 PCDH1Q08174 1060 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 LRRC74AQ0VAA2 488 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 CDC20Q12834 499 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 AQP6Q13520 282 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 CCINQ13939 588 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 VEPH1Q14D04 833 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ECM1Q16610 540 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 MTX3Q5HYI7 312 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 GRTP1Q5TC63 336 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 AGAP6Q5VW22 663 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 TMEM236Q5W0B7 351 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 SLFN12LQ6IEE8 588 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 FAM171BQ6P995 826 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 LIMS2Q7Z4I7 341 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 CDH26Q8IXH8 852 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 PARP8Q8N3A8 854 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 LRTOMTQ8WZ04 291 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 RFFLQ8WZ73 363 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 HSFY1Q96LI6 401 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ZNF597Q96LX8 424 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 AGAP4Q96P64 663 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 CNPY3Q9BT09 278 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 THAP2Q9H0W7 228 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ZDHHC4Q9NPG8 344 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 EVA1BQ9NVM1 165 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 PSMC3IPQ9P2W1 217 aaPredicted RBP5.82□□□□□ -1.48
CLK1-207ENST00000461981 HCSTQ9UBK5 93 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 TRPS1Q9UHF7 1281 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 PCDHGC3Q9UN70 934 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 PCDHB13Q9Y5F0 798 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 ALG6Q9Y672 507 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 MYO16Q9Y6X6 1858 aa5.82□□□□□ -1.48
CLK1-207ENST00000461981 E7ENX8 843 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 RNF103O00237 685 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 TNFRSF10BO14763 440 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 AIM2O14862 343 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 PHGDHO43175 533 aaKnown RBP5.81□□□□□ -1.48
CLK1-207ENST00000461981 SLC37A4O43826 429 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 BANF1O75531 89 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 TOM1L1O75674 476 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 CHRM5P08912 532 aaPredicted RBP5.81□□□□□ -1.48
CLK1-207ENST00000461981 RBP1P09455 135 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 OR52Z1P0C646 297 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 ODC1P11926 461 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 NCAM1P13591 858 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 SLC9A1P19634 815 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 TNFRSF4P43489 277 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 OR2B6P58173 313 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 RPL10AP62906 217 aaKnown RBP5.81□□□□□ -1.48
CLK1-207ENST00000461981 ALDH6A1Q02252 535 aaKnown RBP5.81□□□□□ -1.48
CLK1-207ENST00000461981 BST1Q10588 318 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 FAPQ12884 760 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 GALNT3Q14435 633 aa5.81□□□□□ -1.48
CLK1-207ENST00000461981 MESDQ14696 234 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms