RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TFR2Q9UP52 801 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ST14Q9Y5Y6 855 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 HEBP2Q9Y5Z4 205 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 PTPRQQ9UMZ3 2332 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 LOC400499M0QZD8 3231 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 SCN8AQ9UQD0 1980 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 COL27A1Q8IZC6 1860 aaPredicted RBP8.71□□□□□ -1.01
LDB1-203ENST00000461873 BTNL10A8MVZ5 291 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.71□□□□□ -1.02
LDB1-203ENST00000461873 IFRD1O00458 451 aaPredicted RBP8.71□□□□□ -1.02
LDB1-203ENST00000461873 PJA2O43164 708 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 BUD23O43709 281 aaKnown RBP8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A9O60656 530 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 EML2O95834 649 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 AGTP01019 485 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 MT-ND3P03897 115 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A6P19224 532 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A1P22309 533 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A4P22310 534 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 PSMB4P28070 264 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 CSF2RBP32927 897 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 CD68P34810 354 aaPredicted RBP8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A3P35503 534 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 CHRNA4P43681 627 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 CCR10P46092 362 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 TMPRSS15P98073 1019 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 NFATC3Q12968 1075 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 LAMB3Q13751 1172 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 IL11RAQ14626 422 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 ZRANB3Q5FWF4 1079 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 FAM182AQ5T1J6 154 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 TMTC4Q5T4D3 741 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 AGAP9Q5VTM2 703 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 BORAQ6PGQ7 559 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 KDELC1Q6UW63 502 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 ABRAXAS1Q6UWZ7 409 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 WASH2PQ6VEQ5 465 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 TAS2R42Q7RTR8 314 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 OOSP2Q86WS3 158 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 ZNF843Q8N446 348 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 TTC30BQ8N4P2 665 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 DNAAF3Q8N9W5 541 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 DDHD1Q8NEL9 900 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 OR4K2Q8NGD2 314 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 EXTL1Q92935 676 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 NKD1Q969G9 470 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.71□□□□□ -1.02
LDB1-203ENST00000461873 TADA1Q96BN2 335 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 EID2BQ96D98 161 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 C9orf72Q96LT7 481 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 APOL2Q9BQE5 337 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 TSGA10Q9BZW7 698 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 SLC7A5P2Q9GIP4 190 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A7Q9HAW7 530 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A10Q9HAW8 530 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 UGT1A8Q9HAW9 530 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 FANCEQ9HB96 536 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 WASH6PQ9NQA3 447 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 IL17CQ9P0M4 197 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 IMPACTQ9P2X3 320 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 FAM8A1Q9UBU6 413 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 ACSL5Q9ULC5 683 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 PSMD13Q9UNM6 376 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 PCDHGA4Q9Y5G9 962 aa8.71□□□□□ -1.02
LDB1-203ENST00000461873 ZFYVE26Q68DK2 2539 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 OR52A4PA6NMU1 304 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 B8ZZF3 427 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 KRT86O43790 486 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 SLC28A2O43868 658 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 KDM1AO60341 852 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 SRP72O76094 671 aaKnown RBP8.7□□□□□ -1.02
LDB1-203ENST00000461873 STK17BO94768 372 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 NDUFS1P28331 727 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 PTPN7P35236 360 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 PPARGP37231 505 aaPredicted RBP8.7□□□□□ -1.02
LDB1-203ENST00000461873 SLC19A1P41440 591 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 MARCKSL1P49006 195 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 UBE2IP63279 158 aaKnown RBP8.7□□□□□ -1.02
LDB1-203ENST00000461873 ACY1Q03154 408 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 ADCY2Q08462 1091 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 ABHD18Q0P651 414 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 GPR18Q14330 331 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 PARP6Q2NL67 630 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 DNTTIP2Q5QJE6 756 aaKnown RBP8.7□□□□□ -1.02
LDB1-203ENST00000461873 GPRC6AQ5T6X5 926 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 C6orf15Q6UXA7 325 aaPredicted RBP8.7□□□□□ -1.02
LDB1-203ENST00000461873 FAM92BQ6ZTR7 304 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 ARHGAP22Q7Z5H3 698 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 SNX20Q7Z614 316 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 LINC00523Q86TU6 105 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 PPP1R3BQ86XI6 285 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 DTX1Q86Y01 620 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 CFAP206Q8IYR0 622 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 SIDT2Q8NBJ9 832 aaKnown RBP8.7□□□□□ -1.02
LDB1-203ENST00000461873 ACRBPQ8NEB7 543 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 CCDC110Q8TBZ0 833 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 UBE2Q2Q8WVN8 375 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 UBXN4Q92575 508 aa8.7□□□□□ -1.02
LDB1-203ENST00000461873 TTC9Q92623 222 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms