RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 AGAP14A8MT82 685 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 VIPP01282 170 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 PRSS56P0CW18 603 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 PBLDP30039 288 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-214ENST00000461469 CSTF2P33240 577 aaKnown RBP eCLIP23.13■■□□□ 1.294e-6■■■□□ 17.2
LMBR1-214ENST00000461469 CDKN1CP49918 316 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-214ENST00000461469 DMPKQ09013 629 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 GPR18Q14330 331 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 FNBP1LQ5T0N5 605 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 ANKS6Q68DC2 871 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 CCDC81Q6ZN84 652 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 ARHGEF18Q6ZSZ5 1173 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 PRUNE1Q86TP1 453 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 AMZ2Q86W34 360 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 FAM129CQ86XR2 697 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 TXLNBQ8N3L3 684 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 SLC39A7Q92504 469 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 RSC1A1Q92681 617 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 DNAJC1Q96KC8 554 aaKnown RBP23.13■■□□□ 1.29
LMBR1-214ENST00000461469 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-214ENST00000461469 APMAPQ9HDC9 416 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 PCDHGA3Q9Y5H0 932 aa23.13■■□□□ 1.29
LMBR1-214ENST00000461469 PTMAP06454 111 aaKnown RBP23.12■■□□□ 1.29
LMBR1-214ENST00000461469 LEPRP48357 1165 aaKnown RBP23.12■■□□□ 1.29
LMBR1-214ENST00000461469 OASLQ15646 514 aaKnown RBP23.12■■□□□ 1.29
LMBR1-214ENST00000461469 TRIM48Q8IWZ4 208 aa23.12■■□□□ 1.29
LMBR1-214ENST00000461469 LILRA3Q8N6C8 439 aaPredicted RBP23.12■■□□□ 1.29
LMBR1-214ENST00000461469 CTRCQ99895 268 aa23.12■■□□□ 1.29
LMBR1-214ENST00000461469 B3GNT4Q9C0J1 378 aa23.12■■□□□ 1.29
LMBR1-214ENST00000461469 POT1Q9NUX5 634 aa23.12■■□□□ 1.29
LMBR1-214ENST00000461469 SLC39A1Q9NY26 324 aa23.12■■□□□ 1.29
LMBR1-214ENST00000461469 B4E171 279 aa23.11■■□□□ 1.29
LMBR1-214ENST00000461469 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-214ENST00000461469 C9P02748 559 aa23.11■■□□□ 1.29
LMBR1-214ENST00000461469 AKT1P31749 480 aa23.11■■□□□ 1.29
LMBR1-214ENST00000461469 TSPAN7P41732 249 aa23.11■■□□□ 1.29
LMBR1-214ENST00000461469 PPP1CAP62136 330 aa23.11■■□□□ 1.29
LMBR1-214ENST00000461469 RTP4Q96DX8 246 aa23.11■■□□□ 1.29
LMBR1-214ENST00000461469 ZCCHC2Q9C0B9 1178 aaKnown RBP23.11■■□□□ 1.29
LMBR1-214ENST00000461469 PIKFYVEQ9Y2I7 2098 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 LIASO43766 372 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 UBXN7O94888 489 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 CRTAMO95727 393 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 MSH3P20585 1137 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 GSDMDP57764 484 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 RPE65Q16518 533 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 MEI1Q5TIA1 1274 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 DUS1LQ6P1R4 473 aaKnown RBP23.1■■□□□ 1.29
LMBR1-214ENST00000461469 SLC13A5Q86YT5 568 aaPredicted RBP23.1■■□□□ 1.29
LMBR1-214ENST00000461469 GLIS1Q8NBF1 620 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 AVL9Q8NBF6 648 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 C1orf54Q8WWF1 131 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 CXorf40BQ96DE9 158 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 RNF31Q96EP0 1072 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 DDA1Q9BW61 102 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 SPRY4Q9C004 299 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 SEMA4CQ9C0C4 833 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 SIDT1Q9NXL6 827 aaKnown RBP23.1■■□□□ 1.29
LMBR1-214ENST00000461469 FAM8A1Q9UBU6 413 aa23.1■■□□□ 1.29
LMBR1-214ENST00000461469 CFAP20Q9Y6A4 193 aaKnown RBP23.1■■□□□ 1.29
LMBR1-214ENST00000461469 CCDC78A2IDD5 438 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 ARHGAP6O43182 974 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 KIF1CO43896 1103 aaKnown RBP23.09■■□□□ 1.29
LMBR1-214ENST00000461469 AP2A1O95782 977 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 ETS1P14921 441 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 VCLP18206 1134 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 MC2RQ01718 297 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 RHDQ02161 417 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 POU6F1Q14863 301 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 SIX1Q15475 284 aaPredicted RBP23.09■■□□□ 1.29
LMBR1-214ENST00000461469 KCTD19Q17RG1 926 aaPredicted RBP23.09■■□□□ 1.29
LMBR1-214ENST00000461469 METRNLQ641Q3 311 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 NXPE1Q8N323 547 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 SPDYE1Q8NFV5 336 aaPredicted RBP23.09■■□□□ 1.29
LMBR1-214ENST00000461469 NKD1Q969G9 470 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 C9orf72Q96LT7 481 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 TGM7Q96PF1 710 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 TSGA10Q9BZW7 698 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 EPB41L1Q9H4G0 881 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 LRRC40Q9H9A6 602 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 CRLS1Q9UJA2 301 aa23.09■■□□□ 1.29
LMBR1-214ENST00000461469 DNMT3AQ9Y6K1 912 aaPredicted RBP23.09■■□□□ 1.29
LMBR1-214ENST00000461469 FASNP49327 2511 aaKnown RBP23.08■■□□□ 1.29
LMBR1-214ENST00000461469 ERVH48-1M5A8F1 160 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 CAPN5O15484 640 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-214ENST00000461469 KRT86O43790 486 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 KCNJ13O60928 360 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 CD82P27701 267 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 MC4RP32245 332 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 CCZ1BP86790 482 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 CCZ1P86791 482 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-214ENST00000461469 LONRF2Q1L5Z9 754 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 BCL7AQ4VC05 210 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 SEL1L2Q5TEA6 688 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 TMEM164Q5U3C3 297 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 PPP1R2P1Q96PQ5 205 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 INSM2Q96T92 566 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-214ENST00000461469 WWP1Q9H0M0 922 aa23.08■■□□□ 1.29
LMBR1-214ENST00000461469 FEZ2Q9UHY8 353 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-214ENST00000461469 KALRNO60229 2985 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms