RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 PREPP48147 710 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CCT5P48643 541 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 AGTR2P50052 363 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 IL9RQ01113 521 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 STARD3Q14849 445 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 SPRED3Q2MJR0 410 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CCSMST1Q4G0I0 132 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 UNC50Q53HI1 259 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 AARS2Q5JTZ9 985 aaKnown RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 RNF187Q5TA31 235 aaPredicted RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 CWF19L1Q69YN2 538 aaKnown RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 PTRHD1Q6GMV3 140 aaKnown RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 ANO7Q6IWH7 933 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 PNCKQ6P2M8 343 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 DOK6Q6PKX4 331 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CRTC3Q6UUV7 619 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 SBSNQ6UWP8 590 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 KYAT3Q6YP21 454 aaKnown RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 CERS6Q6ZMG9 384 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 ZNF852Q6ZMS4 543 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 ZNF765Q7L2R6 523 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 C11orf96Q7Z7L8 435 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 NLRP8Q86W28 1048 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 HEATR4Q86WZ0 1026 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 RASGRP3Q8IV61 690 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 NRSN1Q8IZ57 195 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 GANCQ8TET4 914 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 KCNJ9Q92806 393 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 ESAMQ96AP7 390 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CHMP6Q96FZ7 201 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 NSUN5Q96P11 429 aaKnown RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 VPS35Q96QK1 796 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 ORAI3Q9BRQ5 295 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 SHCBP1LQ9BZQ2 653 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CLPBQ9H078 707 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 OR2AG1Q9H205 316 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 C6orf106Q9H6K1 298 aaPredicted RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 POPDC3Q9HBV1 291 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 DYRK4Q9NR20 520 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 PNPOQ9NVS9 261 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 USP36Q9P275 1121 aaKnown RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 THEGQ9P2T0 379 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 SLC23A2Q9UGH3 650 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CIDEBQ9UHD4 219 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 TLK1Q9UKI8 766 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CORO1CQ9ULV4 474 aaPredicted RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 OR1A2Q9Y585 309 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 ST14Q9Y5Y6 855 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 TECTAO75443 2155 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 PLXND1Q9Y4D7 1925 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 KANSL1LA0AUZ9 987 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 RGSL1A5PLK6 1076 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 POM121BA6NF01 834 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 TMEM233B4DJY2 109 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 CHURC1-FNTBB4DL54 471 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 UBFD1O14562 309 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 SLC31A1O15431 190 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 TM7SF2O76062 418 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 DNTTP04053 509 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 JUNP05412 331 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 IGHV4-34P06331 123 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 DCNP07585 359 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 VIMP08670 466 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 COL6A2P12110 1019 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 ATP1B2P14415 290 aaPredicted RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 ZNF7P17097 686 aaPredicted RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 CD9P21926 228 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 PDHA2P29803 388 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 GPR1P46091 355 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 SLC12A2P55011 1212 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 CDK3Q00526 305 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 DPTQ07507 201 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 INPP5AQ14642 412 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 PPP1R3AQ16821 1122 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 PREPLQ4J6C6 727 aaPredicted RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 EOGTQ5NDL2 527 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 ADAMTSL4Q6UY14 1074 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 PIGWQ7Z7B1 504 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 TBC1D1Q86TI0 1168 aaPredicted RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 HORMAD1Q86X24 394 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 NUDCD3Q8IVD9 361 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 ZBTB2Q8N680 514 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 DEFB119Q8N690 84 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 CCDC63Q8NA47 563 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 MAPK15Q8TD08 544 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 DTX3LQ8TDB6 740 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 DYDC1Q8WWB3 177 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 SCG3Q8WXD2 468 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.59□□□□□ -1.03
RIF1-208ENST00000457745 KIAA1191Q96A73 305 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 RAB7BQ96AH8 199 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 TSPAN17Q96FV3 270 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 CABS1Q96KC9 395 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 RMDN2Q96LZ7 410 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 ELAC2Q9BQ52 826 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 ZSCAN5AQ9BUG6 496 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 PITPNM3Q9BZ71 974 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 DERL2Q9GZP9 239 aa8.59□□□□□ -1.03
RIF1-208ENST00000457745 MRPL46Q9H2W6 279 aaKnown RBP8.59□□□□□ -1.03
RIF1-208ENST00000457745 GSTO2Q9H4Y5 243 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms