RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 DNAJC3Q13217 504 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 CUL1Q13616 776 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 ITIH4Q14624 930 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 BRD3Q15059 726 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 ELOCQ15369 112 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 ZNF658BQ4V348 819 aaPredicted RBP13.83□□□□□ -0.2
TIMP1-205ENST00000456754 BCL7AQ4VC05 210 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 ARMC3Q5W041 872 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 ZNF549Q6P9A3 640 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 PACS1Q6VY07 963 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 PALM2Q8IXS6 379 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 FAM46DQ8NEK8 389 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 UHMK1Q8TAS1 419 aaKnown RBP13.83□□□□□ -0.2
TIMP1-205ENST00000456754 GSDMBQ8TAX9 411 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 NETO1Q8TDF5 533 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 RHBDD1Q8TEB9 315 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.83□□□□□ -0.2
TIMP1-205ENST00000456754 BIRC8Q96P09 236 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 NAT9Q9BTE0 207 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 ZCCHC2Q9C0B9 1178 aaKnown RBP13.83□□□□□ -0.2
TIMP1-205ENST00000456754 CDC42EP4Q9H3Q1 356 aaKnown RBP13.83□□□□□ -0.2
TIMP1-205ENST00000456754 OSGEPL1Q9H4B0 414 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 RMI1Q9H9A7 625 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 MOCS1Q9NZB8 636 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 FBXO5Q9UKT4 447 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 PCOLCE2Q9UKZ9 415 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 GPR34Q9UPC5 381 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 WDR37Q9Y2I8 494 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 PCDHGB2Q9Y5G2 931 aa13.83□□□□□ -0.2
TIMP1-205ENST00000456754 CNOT1A5YKK6 2376 aaKnown RBP13.83□□□□□ -0.2
TIMP1-205ENST00000456754 RP1P56715 2156 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 TCRBV9S1A1TA0A576 114 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 DCDC2BA2VCK2 349 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 CFAP99D6REC4 459 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 YKT6O15498 198 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 NOBOXO60393 691 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 OGNP20774 298 aaKnown RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 RPL10P27635 214 aaKnown RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 NSG1P42857 185 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 PREPP48147 710 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 TTPAP49638 278 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 CSE1LP55060 971 aaKnown RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 MAZP56270 477 aaKnown RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 MRNIPQ6NTE8 343 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 CERS6Q6ZMG9 384 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 C3orf62Q6ZUJ4 267 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 SLC35F3Q8IY50 421 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 FSTL5Q8N475 847 aaPredicted RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 C2CD4AQ8NCU7 369 aaPredicted RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 OR4C6Q8NH72 309 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 BAHD1Q8TBE0 780 aaPredicted RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 FBF1Q8TES7 1133 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 APOLD1Q96LR9 279 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 NDNQ99608 321 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 GSDMCQ9BYG8 508 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 DPEP2Q9H4A9 486 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 VPS37BQ9H9H4 285 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 NLGN3Q9NZ94 848 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 MTRF1LQ9UGC7 380 aaKnown RBP13.82□□□□□ -0.2
TIMP1-205ENST00000456754 PSMD13Q9UNM6 376 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 DOLKQ9UPQ8 538 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 CSNK1G3Q9Y6M4 447 aa13.82□□□□□ -0.2
TIMP1-205ENST00000456754 SPAARA0A1B0GVQ0 90 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 A6NCN8 305 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 GPR89AB7ZAQ6 455 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 PRMT5O14744 637 aaPredicted RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 SLC30A4O14863 429 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 FLRT2O43155 660 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 FOXD2O60548 495 aaPredicted RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 FAM155BO75949 473 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 TRIM16O95361 564 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 ACSL3O95573 720 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 GPR89BP0CG08 455 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 RALBP11234 206 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 BRAFP15056 766 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 PDHA2P29803 388 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 CCR7P32248 378 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 GRK6P43250 576 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 ARHGAP8P85298 464 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 PROX2Q3B8N5 592 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 AARS2Q5JTZ9 985 aaKnown RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 C6orf132Q5T0Z8 1188 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 RBM20Q5T481 1227 aaKnown RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 LYPLAL1Q5VWZ2 237 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 SDCCAG8Q86SQ7 713 aaPredicted RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 AMZ2Q86W34 360 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 ZNF761Q86XN6 746 aaPredicted RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 GKN2Q86XP6 184 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 CCNJLQ8IV13 435 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 CNTN4Q8IWV2 1026 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 CFAP206Q8IYR0 622 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 NAGSQ8N159 534 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 ATXN7L3BQ96GX2 97 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 SLC30A3Q99726 388 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 TIMM29Q9BSF4 260 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 FAM167BQ9BTA0 163 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms