RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 PYCARDQ9ULZ3 195 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 CCDC162PA2VCL2 907 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 OR5K4A6NMS3 321 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 ZNF185O15231 689 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 KIF5CO60282 957 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 DXOO77932 396 aaKnown RBP24.41■■□□□ 1.5
MSH2-203ENST00000454849 GAS8O95995 478 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 JMJD7P0C870 316 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 TYRP1P17643 537 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 CRADDP78560 199 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 RASGEF1CQ8N431 466 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 LILRA3Q8N6C8 439 aaPredicted RBP24.41■■□□□ 1.5
MSH2-203ENST00000454849 MAGOHBQ96A72 148 aaKnown RBP24.41■■□□□ 1.5
MSH2-203ENST00000454849 ULK4Q96C45 1275 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 CXorf40BQ96DE9 158 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 PDLIM2Q96JY6 352 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 ZNF578Q96N58 590 aaPredicted RBP24.41■■□□□ 1.5
MSH2-203ENST00000454849 COPS8Q99627 209 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 THSD1Q9NS62 852 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 WDR70Q9NW82 654 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 KLHL3Q9UH77 587 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 PCDHGA8Q9Y5G5 932 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 CFAP20Q9Y6A4 193 aaKnown RBP24.41■■□□□ 1.5
MSH2-203ENST00000454849 CFAP47Q6ZTR5 3102 aa24.41■■□□□ 1.5
MSH2-203ENST00000454849 AGAP14A8MT82 685 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 POLBP06746 335 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 CCL4P13236 92 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 XRCC1P18887 633 aaPredicted RBP24.4■■□□□ 1.5
MSH2-203ENST00000454849 MAPK10P53779 464 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 SKIDA1Q1XH10 827 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 ABRAXAS1Q6UWZ7 409 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 SNIP1Q8TAD8 396 aaKnown RBP24.4■■□□□ 1.5
MSH2-203ENST00000454849 HDAC10Q969S8 669 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 SH3KBP1Q96B97 665 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 OSBPL9Q96SU4 736 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 ZDHHC3Q9NYG2 299 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 ZNF106Q9H2Y7 1883 aaKnown RBP24.4■■□□□ 1.5
MSH2-203ENST00000454849 LAMA5O15230 3695 aa24.4■■□□□ 1.5
MSH2-203ENST00000454849 A0A087WV48 116 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 TCRBV7S3A2A0A539 114 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 DUX1O43812 170 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 ATP1B2P14415 290 aaPredicted RBP24.39■■□□□ 1.49
MSH2-203ENST00000454849 MSNP26038 577 aaKnown RBP24.39■■□□□ 1.49
MSH2-203ENST00000454849 LIMK2P53671 638 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 GPLD1P80108 840 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 DBN1Q16643 649 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 AGAP9Q5VTM2 703 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 TMEM26Q6ZUK4 368 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 CFAP206Q8IYR0 622 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 CLDN19Q8N6F1 224 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 SPDYE1Q8NFV5 336 aaPredicted RBP24.39■■□□□ 1.49
MSH2-203ENST00000454849 OR4D9Q8NGE8 314 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 OR13J1Q8NGT2 312 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 WWP1Q9H0M0 922 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 HOMER3Q9NSC5 361 aa24.39■■□□□ 1.49
MSH2-203ENST00000454849 MGAT4DA6NG13 374 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 RRP8O43159 456 aaKnown RBP24.38■■□□□ 1.49
MSH2-203ENST00000454849 RALBP11234 206 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 ACRV1P26436 265 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 SLC5A2P31639 672 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 PCBP4P57723 403 aaKnown RBP24.38■■□□□ 1.49
MSH2-203ENST00000454849 ERVPABLB-1P60509 514 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 CACNG1Q06432 222 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 RPE65Q16518 533 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 GPR33Q49SQ1 333 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 TSTD2Q5T7W7 516 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 DUS1LQ6P1R4 473 aaKnown RBP24.38■■□□□ 1.49
MSH2-203ENST00000454849 TMEM71Q6P5X7 295 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 XKR5Q6UX68 686 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 WASH2PQ6VEQ5 465 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 LRRC69Q6ZNQ3 347 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 GPR150Q8NGU9 434 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 ZNF514Q96K75 400 aaPredicted RBP24.38■■□□□ 1.49
MSH2-203ENST00000454849 CMKLR1Q99788 373 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 SLC40A1Q9NP59 571 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 WASH6PQ9NQA3 447 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 CHRAC1Q9NRG0 131 aa24.38■■□□□ 1.49
MSH2-203ENST00000454849 DNMT3AQ9Y6K1 912 aaPredicted RBP24.38■■□□□ 1.49
MSH2-203ENST00000454849 TRBV5-4A0A0C4DH59 114 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 HEATR9A2RTY3 570 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 CDRT15L2A8MXV6 281 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 H7C0S8 307 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 KRT14P02533 472 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 ADRA1DP25100 572 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 HALP42357 657 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 DMPKQ09013 629 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 GPS1Q13098 491 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 SQSTM1Q13501 440 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 GPR18Q14330 331 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 BCL7AQ4VC05 210 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 METRNLQ641Q3 311 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 OR6P1Q8NGX9 317 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 OR2L2Q8NH16 312 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 USP7Q93009 1102 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.37■■□□□ 1.49
MSH2-203ENST00000454849 IMP3Q9NV31 184 aaKnown RBP24.37■■□□□ 1.49
MSH2-203ENST00000454849 OGFRQ9NZT2 677 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 LHX6Q9UPM6 363 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 TCAF1Q9Y4C2 921 aa24.37■■□□□ 1.49
MSH2-203ENST00000454849 PRSS21Q9Y6M0 314 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms