RNA–Protein interactions for RNA: ENST00000452172.1

XPC-203, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-203ENST00000452172 PLXNA4Q9HCM2 1894 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 DENND3A2RUS2 1198 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TARM1B6A8C7 271 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 P4HA2O15460 535 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 MSI1O43347 362 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 LIASO43766 372 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 HNRNPCL1O60812 293 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 TSPAN9O75954 239 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 GGPS1O95749 300 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 DDAH2O95865 285 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 IL1AP01583 271 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 CHRM5P08912 532 aaPredicted RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 CD59P13987 128 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ZNF8P17098 575 aaPredicted RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 MCCP23508 829 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 POU1F1P28069 291 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TACR3P29371 465 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 HOXC13P31276 330 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ACSL1P33121 698 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TTKP33981 857 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 GARSP41250 739 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 METAP2P50579 478 aaKnown RBP eCLIP3.44□□□□□ -1.86
XPC-203ENST00000452172 BLKP51451 505 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 SNX16P57768 344 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 CEBPZQ03701 1054 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 BECN1Q14457 450 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 GSTA3Q16772 222 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ME3Q16798 604 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 SERTAD4-AS1Q5TG53 156 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 VWA5B1Q5TIE3 1220 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TMEM268Q5VZI3 342 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ATG9BQ674R7 924 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 CTR9Q6PD62 1173 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 KLHL35Q6PF15 583 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 RBM44Q6ZP01 1051 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 Q6ZPA2 131 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ZNF627Q7L945 461 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 GPAT4Q86UL3 456 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 CHSY1Q86X52 802 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TICAM1Q8IUC6 712 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ZNF444Q8N0Y2 327 aaPredicted RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 C17orf53Q8N3J3 647 aaPredicted RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 HDDC3Q8N4P3 179 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 FAM47BQ8NA70 645 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TMEM116Q8NCL8 245 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 PIGKQ92643 395 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ARHGEF2Q92974 986 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 SMARCE1Q969G3 411 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ELSPBP1Q96BH3 223 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 UROC1Q96N76 676 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 WDFY2Q96P53 400 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TEFMQ96QE5 360 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 FRG2BQ96QU4 278 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TIMP4Q99727 224 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ZNF747Q9BV97 191 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 IFT27Q9BW83 186 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 NUSAP1Q9BXS6 441 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 PLA2G2FQ9BZM2 168 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 FZD8Q9H461 694 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TOR3AQ9H497 397 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 POLR1BQ9H9Y6 1135 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 SCPEP1Q9HB40 452 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ZNF334Q9HCZ1 680 aaPredicted RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 MRPL17Q9NRX2 175 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 ASB6Q9NWX5 421 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 GDE1Q9NZC3 331 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 GRHL1Q9NZI5 618 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 SLC17A6Q9P2U8 582 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 CTNNAL1Q9UBT7 734 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 RPS6KA6Q9UK32 745 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 INTS6Q9UL03 887 aaKnown RBP3.44□□□□□ -1.86
XPC-203ENST00000452172 MAFFQ9ULX9 164 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 SLC8A2Q9UPR5 921 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TMEM5Q9Y2B1 443 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ADAM18Q9Y3Q7 739 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 TRPV2Q9Y5S1 764 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 SNX8Q9Y5X2 465 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 COL6A6A6NMZ7 2263 aa3.44□□□□□ -1.86
XPC-203ENST00000452172 ARHGEF17Q96PE2 2063 aaPredicted RBP3.43□□□□□ -1.86
XPC-203ENST00000452172 CYP2D7A0A087X1C5 515 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 SLC22A23A1A5C7 686 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 LRRC53A6NM62 1247 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 MYO1GB0I1T2 1018 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 EIF3CLB5ME19 914 aaKnown RBP3.43□□□□□ -1.86
XPC-203ENST00000452172 M0QZ92 97 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 BCAT2O15382 392 aaPredicted RBP3.43□□□□□ -1.86
XPC-203ENST00000452172 AKAP8O43823 692 aaKnown RBP3.43□□□□□ -1.86
XPC-203ENST00000452172 ATG13O75143 517 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 RPS6KA5O75582 802 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 BEST1O76090 585 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 PGM3O95394 542 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 NFATC1O95644 943 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 GLUD1P00367 558 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 PLAUP00749 431 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 DNTTP04053 509 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 HEXAP06865 529 aa3.43□□□□□ -1.86
XPC-203ENST00000452172 NHLRC4P0CG21 123 aaPredicted RBP3.43□□□□□ -1.86
XPC-203ENST00000452172 CDH2P19022 906 aaPredicted RBP3.43□□□□□ -1.86
XPC-203ENST00000452172 WT1P19544 449 aaPredicted RBP3.43□□□□□ -1.86
XPC-203ENST00000452172 EDN2P20800 178 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms