RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CHRFAM7AQ494W8 412 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 ACCSLQ4AC99 568 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 PITRM1Q5JRX3 1037 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 FNDC7Q5VTL7 733 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 FOXR2Q6PJQ5 311 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 ENPP7Q6UWV6 458 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 PAQR9Q6ZVX9 377 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 MED25Q71SY5 747 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 SCD5Q86SK9 330 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 VPS36Q86VN1 386 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 MFN1Q8IWA4 741 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 FAM217AQ8IXS0 508 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 LILRB2Q8N423 598 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 ZMIZ2Q8NF64 920 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 CCDC148Q8NFR7 591 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 CACTINQ8WUQ7 758 aaKnown RBP4.92□□□□□ -1.62
SDCBP-205ENST00000447267 JAKMIP2Q96AA8 810 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 MYEOVQ96EZ4 313 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 MED10Q9BTT4 135 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 MSTO1Q9BUK6 570 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 ELOVL4Q9GZR5 314 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 OR10A2Q9H208 303 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 TNMDQ9H2S6 317 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 C12orf65Q9H3J6 166 aaKnown RBP4.92□□□□□ -1.62
SDCBP-205ENST00000447267 SPATS2LQ9NUQ6 558 aaKnown RBP4.92□□□□□ -1.62
SDCBP-205ENST00000447267 GDAP2Q9NXN4 497 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 PDP2Q9P2J9 529 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 SEC14L3Q9UDX4 400 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 Q9UFV3 132 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 KCNG1Q9UIX4 513 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 C2CD2Q9Y426 696 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 CLDN4O14493 209 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 SLC19A2O60779 497 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 SPAG6O75602 509 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 TOXO94900 526 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 ZNF202O95125 648 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 BAG4O95429 457 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 ALPPP05187 535 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 CD53P19397 219 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 WARSP23381 471 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 PDIA3P30101 505 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 SDHAP31040 664 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 IGFALSP35858 605 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 PNPLA4P41247 253 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 BLKP51451 505 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 NDST1P52848 882 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 SRP54P61011 504 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 DCAF7P61962 342 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 RPS21P63220 83 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 TFF3Q07654 80 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 MYBPC3Q14896 1274 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 CLPPQ16740 277 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 TMEM177Q53S58 311 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 ANKRD45Q5TZF3 282 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 PRAMEF17Q5VTA0 474 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 RNF219Q5W0B1 726 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 HEPHL1Q6MZM0 1159 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 KLHDC10Q6PID8 442 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 MACC1Q6ZN28 852 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 YTHDF3Q7Z739 585 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 CXorf67Q86X51 503 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 BLIDQ8IZY5 108 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 GALNT16Q8N428 558 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 CARNMT1Q8N4J0 409 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 IGSF22Q8N9C0 903 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 TMEM161BQ8NDZ6 487 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 ATL2Q8NHH9 583 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 TM9SF4Q92544 642 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 NR4A3Q92570 626 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 FUBP1Q96AE4 644 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 TCEANC2Q96MN5 208 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 CLUHP3Q96NS8 147 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 IPO9Q96P70 1041 aaKnown RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 LENG8Q96PV6 779 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-205ENST00000447267 SMOQ99835 787 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 FEM1AQ9BSK4 669 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 NDC1Q9BTX1 674 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 GPR87Q9BY21 358 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 C22orf23Q9BZE7 217 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 ASB7Q9H672 318 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 MAGEL2Q9UJ55 1249 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 PRDM4Q9UKN5 801 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 ZANQ9Y493 2812 aa4.91□□□□□ -1.62
SDCBP-205ENST00000447267 TRRAPQ9Y4A5 3859 aa4.9□□□□□ -1.62
SDCBP-205ENST00000447267 TISP43B9A030 160 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 GSTA4O15217 222 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 FGF1P05230 155 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 FAM157CP0CG43 387 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 GCFC2P16383 781 aaKnown RBP4.9□□□□□ -1.63
SDCBP-205ENST00000447267 NAT1P18440 290 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 UGT1A4P22310 534 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 ACRV1P26436 265 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 CDC25AP30304 524 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 LIG4P49917 911 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 VAV2P52735 878 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 NDST2P52849 883 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 MAP3K7CLP57077 242 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 DMTNQ08495 405 aa4.9□□□□□ -1.63
SDCBP-205ENST00000447267 MAPK7Q13164 816 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms