RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PKMP14618 531 aaKnown RBP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 TCF3P15923 654 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 CHRNB3Q05901 458 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 TRAF2Q12933 501 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 SKIV2LQ15477 1246 aaKnown RBP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 ZIK1Q3SY52 487 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 GTF2IRD2BQ6EKJ0 949 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 GTF2IRD2Q86UP8 949 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 OR8J3Q8NGG0 315 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 CHPT1Q8WUD6 406 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 GLT1D1Q96MS3 346 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 ACTL8Q9H568 366 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 GORASP2Q9H8Y8 452 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 ANKRD28O15084 1053 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 OAZ2O95190 189 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 TBX18O95935 607 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 BCL10O95999 233 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 RPLP2P05387 115 aaKnown RBP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 ERVPABLB-1P60509 514 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 PHEXP78562 749 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 EPS8Q12929 822 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 PWP1Q13610 501 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 SELPLGQ14242 412 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 NFE2Q16621 373 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 TTC23Q5W5X9 447 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 C16orf87Q6PH81 154 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 CLEC4FQ8N1N0 589 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 CDYL2Q8N8U2 506 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 EIF2B4Q9UI10 523 aaKnown RBP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 TRMT6Q9UJA5 497 aaKnown RBP18.85■□□□□ 0.61
SDCBP-204ENST00000447182 B3GNT3Q9Y2A9 372 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 ASB1Q9Y576 335 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 RSL1D1O76021 490 aaKnown RBP18.84■□□□□ 0.61
SDCBP-204ENST00000447182 IL2P60568 153 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 SLC44A4Q53GD3 710 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 GLT6D1Q7Z4J2 308 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 STK32CQ86UX6 486 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 ZDHHC13Q8IUH4 622 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 C8orf59Q8N0T1 100 aaPredicted RBP18.84■□□□□ 0.61
SDCBP-204ENST00000447182 ZBTB8BQ8NAP8 495 aaPredicted RBP18.84■□□□□ 0.61
SDCBP-204ENST00000447182 PPM1MQ96MI6 270 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 UGT2B28Q9BY64 529 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 LHPPQ9H008 270 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 SMPD4Q9NXE4 827 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 CD274Q9NZQ7 290 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 MARCH2Q9P0N8 246 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 NEUROG3Q9Y4Z2 214 aa18.84■□□□□ 0.61
SDCBP-204ENST00000447182 C16orf96A6NNT2 1141 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 INPPL1O15357 1258 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 JAK1P23458 1154 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 MTHFRP42898 656 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 CLCN4P51793 760 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 MTPNP58546 118 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 GABARAPL2P60520 117 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 KCNC4Q03721 635 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 RING1Q06587 406 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 CYP20A1Q6UW02 462 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 MIB1Q86YT6 1006 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 MDGA1Q8NFP4 955 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 OR52B6Q8NGF0 335 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 CD200R1Q8TD46 325 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 SLC22A17Q8WUG5 538 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 EEF1AKMT1Q8WVE0 214 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 MYEOVQ96EZ4 313 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 FEM1AQ9BSK4 669 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 ZNF408Q9H9D4 720 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 CPA4Q9UI42 421 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 COQ6Q9Y2Z9 468 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 ZNF711Q9Y462 761 aa18.83■□□□□ 0.61
SDCBP-204ENST00000447182 ARIH1Q9Y4X5 557 aaPredicted RBP18.83■□□□□ 0.61
SDCBP-204ENST00000447182 C2orf81A6NN90 581 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 PFDN6O15212 129 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 CLPXO76031 633 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 IGHA2P01877 340 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 OCM2P0CE71 109 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 OCMP0CE72 109 aaPredicted RBP18.83■□□□□ 0.6
SDCBP-204ENST00000447182 HOXD9P28356 352 aaPredicted RBP18.83■□□□□ 0.6
SDCBP-204ENST00000447182 MAGEA8P43361 318 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 TTPAP49638 278 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 CTSL3PQ5NE16 218 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 LETMD1Q6P1Q0 360 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 R3HCC1LQ7Z5L2 792 aaKnown RBP18.83■□□□□ 0.6
SDCBP-204ENST00000447182 FAM126BQ8IXS8 530 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 CENPSQ8N2Z9 138 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 CHCHD4Q8N4Q1 142 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 SIDT2Q8NBJ9 832 aaKnown RBP18.83■□□□□ 0.6
SDCBP-204ENST00000447182 PJA1Q8NG27 643 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 ESAMQ96AP7 390 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 LINGO1Q96FE5 620 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 ZNF583Q96ND8 569 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 PSKH2Q96QS6 385 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 ADAM2Q99965 735 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 TOR3AQ9H497 397 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 FAM118AQ9NWS6 357 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 USE1Q9NZ43 259 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 DNAJB9Q9UBS3 223 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 SEPT3Q9UH03 358 aa18.83■□□□□ 0.6
SDCBP-204ENST00000447182 FUOMA2VDF0 154 aa18.82■□□□□ 0.6
SDCBP-204ENST00000447182 G3V2T6 193 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms