RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 DLG3Q92796 817 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 CDRT15Q96T59 188 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 COPS8Q99627 209 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 DPP7Q9UHL4 492 aa17.21■□□□□ 0.34
SMC6-206ENST00000446852 A0A1W2PQ67 120 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 GCKP35557 465 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 DGKGP49619 791 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 PHKG1Q16816 387 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 BNC2Q6ZN30 1099 aaPredicted RBP17.2■□□□□ 0.34
SMC6-206ENST00000446852 PDPRQ8NCN5 879 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 OSCP1Q8WVF1 389 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 MCOLN1Q9GZU1 580 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 NSUN3Q9H649 340 aaKnown RBP17.2■□□□□ 0.34
SMC6-206ENST00000446852 SPATS2LQ9NUQ6 558 aaKnown RBP17.2■□□□□ 0.34
SMC6-206ENST00000446852 PPM1HQ9ULR3 514 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 IGLV3-16A0A075B6K0 115 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 CRCPO75575 148 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 GPX3P22352 226 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 ATP4BP51164 291 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 THOP1P52888 689 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 ART3Q13508 389 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 PCBP2Q15366 365 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMC6-206ENST00000446852 PIGGQ5H8A4 983 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 PDE12Q6L8Q7 609 aaKnown RBP17.2■□□□□ 0.34
SMC6-206ENST00000446852 PAOXQ6QHF9 649 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 GPRIN3Q6ZVF9 776 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 FUNDC1Q8IVP5 155 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 TUBGCP3Q96CW5 907 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 CDK15Q96Q40 435 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 ZNF382Q96SR6 550 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 ELOVL2Q9NXB9 296 aa17.2■□□□□ 0.34
SMC6-206ENST00000446852 LRRK1Q38SD2 2015 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 MUC22E2RYF6 1773 aaPredicted RBP17.19■□□□□ 0.34
SMC6-206ENST00000446852 CFLARO15519 480 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 OR4F21O95013 312 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 GUCA1CO95843 209 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 UROSP10746 265 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 ANPEPP15144 967 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 PKNOX1P55347 436 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 LRRC74BQ6ZQY2 392 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 HSD11B1LQ7Z5J1 315 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 ST13P5Q8NFI4 369 aaPredicted RBP17.19■□□□□ 0.34
SMC6-206ENST00000446852 ZFYVE19Q96K21 471 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 ZNF570Q96NI8 536 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 ACOX2Q99424 681 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 FAM126AQ9BYI3 521 aaPredicted RBP17.19■□□□□ 0.34
SMC6-206ENST00000446852 PCDH12Q9NPG4 1184 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 CACNA2D2Q9NY47 1150 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 OARD1Q9Y530 152 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 RAD51BO15315 384 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 TAPBPO15533 448 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 VIPR1P32241 457 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 NNMTP40261 264 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 ERVPABLB-1P60509 514 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 CEACAM7Q14002 265 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 ARHGEF7Q14155 803 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 MAPRE2Q15555 327 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 ZNF423Q2M1K9 1284 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 POM121L1PQ3SYA9 428 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 REP15Q6BDI9 236 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 LETMD1Q6P1Q0 360 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 VN1R2Q8NFZ6 395 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 PYDC1Q8WXC3 89 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 SCAMP4Q969E2 229 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 APOL5Q9BWW9 433 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 NUSAP1Q9BXS6 441 aaKnown RBP17.19■□□□□ 0.34
SMC6-206ENST00000446852 MRPL1Q9BYD6 325 aaKnown RBP17.19■□□□□ 0.34
SMC6-206ENST00000446852 NOL11Q9H8H0 719 aaKnown RBP17.19■□□□□ 0.34
SMC6-206ENST00000446852 LATS2Q9NRM7 1088 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 IL36AQ9UHA7 158 aa17.19■□□□□ 0.34
SMC6-206ENST00000446852 XIRP2A4UGR9 3374 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 TSPAN11A1L157 253 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 HOXC11O43248 304 aaPredicted RBP17.18■□□□□ 0.34
SMC6-206ENST00000446852 TULP3O75386 442 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 SNRPB2P08579 225 aaKnown RBP17.18■□□□□ 0.34
SMC6-206ENST00000446852 RPSAP08865 295 aaKnown RBP17.18■□□□□ 0.34
SMC6-206ENST00000446852 HGFP14210 728 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 TIMP2P16035 220 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 ACADVLP49748 655 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 ERVK-21P61565 698 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 XKR7Q5GH72 579 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 FAM78AQ5JUQ0 283 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 ZDHHC20Q5W0Z9 365 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 TLDC1Q6P9B6 456 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 SCIMPQ6UWF3 145 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 GOLGA7Q7Z5G4 137 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 NPAS3Q8IXF0 933 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 CDYL2Q8N8U2 506 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 HIPK4Q8NE63 616 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 NMRK1Q9NWW6 199 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 NDE1Q9NXR1 346 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 PTBP2Q9UKA9 531 aaKnown RBP17.18■□□□□ 0.34
SMC6-206ENST00000446852 YBX2Q9Y2T7 364 aaKnown RBP17.18■□□□□ 0.34
SMC6-206ENST00000446852 ST14Q9Y5Y6 855 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 COL4A3Q01955 1670 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 KIAA1549LQ6ZVL6 1849 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 OTOL1A6NHN0 477 aaPredicted RBP17.18■□□□□ 0.34
SMC6-206ENST00000446852 UPK3BL1B0FP48 263 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 UPK3BL2E5RIL1 263 aa17.18■□□□□ 0.34
SMC6-206ENST00000446852 OR7A17O14581 309 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms