RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 HGSO14964 777 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 KIF5CO60282 957 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 JMJD7P0C870 316 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 ATP1B2P14415 290 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 HOXB3P14651 431 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 BRAFP15056 766 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 ADRA1DP25100 572 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 DRG2P55039 364 aaKnown RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 CFHR1Q03591 330 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 CACNG1Q06432 222 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 SEPT7Q16181 437 aaKnown RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 ZRANB3Q5FWF4 1079 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 METRNLQ641Q3 311 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 DET1Q7L5Y6 550 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 NLRP9Q7RTR0 991 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 CLEC14AQ86T13 490 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 RBM12BQ8IXT5 1001 aaKnown RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 SLC35F6Q8N357 371 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 OR2L2Q8NH16 312 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 LINC00615Q96LM1 132 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 POT1Q9NUX5 634 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 TRMT1Q9NXH9 659 aaKnown RBP18.29■□□□□ 0.52
CCDC188-202ENST00000444532 PDP2Q9P2J9 529 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 LOXL2Q9Y4K0 774 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 PKD1L2Q7Z442 2459 aa18.29■□□□□ 0.52
CCDC188-202ENST00000444532 ADAMTS20P59510 1910 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 AP3B1O00203 1094 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 SGTAO43765 313 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 ACRV1P26436 265 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CSF2RBP32927 897 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 GRIA1P42261 906 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 PPM1FP49593 454 aaPredicted RBP18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CDK16Q00536 496 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CLCA4Q14CN2 919 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CCDC38Q502W7 563 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 TMEM26Q6ZUK4 368 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 TAS2R42Q7RTR8 314 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 SERPINA9Q86WD7 417 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 BEND7Q8N7W2 519 aaPredicted RBP18.28■□□□□ 0.52
CCDC188-202ENST00000444532 HNRNPLLQ8WVV9 542 aaKnown RBP18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CXorf40BQ96DE9 158 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CCDC97Q96F63 343 aaPredicted RBP18.28■□□□□ 0.52
CCDC188-202ENST00000444532 MS4A14Q96JA4 679 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CCDC74BQ96LY2 380 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 SLC40A1Q9NP59 571 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 ACSL5Q9ULC5 683 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 WDR37Q9Y2I8 494 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 PCDHGA7Q9Y5G6 932 aa18.28■□□□□ 0.52
CCDC188-202ENST00000444532 CES2O00748 559 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 THRAP10827 490 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 PBLDP30039 288 aaPredicted RBP18.27■□□□□ 0.52
CCDC188-202ENST00000444532 CDKN1CP49918 316 aaPredicted RBP18.27■□□□□ 0.52
CCDC188-202ENST00000444532 BASP1P80723 227 aaKnown RBP18.27■□□□□ 0.52
CCDC188-202ENST00000444532 NFE2L1Q14494 772 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 C16orf72Q14CZ0 275 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 TSTD2Q5T7W7 516 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 FAM83HQ6ZRV2 1179 aaPredicted RBP18.27■□□□□ 0.52
CCDC188-202ENST00000444532 NCSTNQ92542 709 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 PEX13Q92968 403 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 MAGOHBQ96A72 148 aaKnown RBP18.27■□□□□ 0.52
CCDC188-202ENST00000444532 OSBPL9Q96SU4 736 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 TBC1D10AQ9BXI6 508 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 ZMYND15Q9H091 742 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 PISDQ9UG56 409 aa18.27■□□□□ 0.52
CCDC188-202ENST00000444532 C17orf113A0A1B0GUU1 675 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 OR52A4PA6NMU1 304 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 PGRMC1O00264 195 aaKnown RBP18.26■□□□□ 0.51
CCDC188-202ENST00000444532 NVLO15381 856 aaKnown RBP18.26■□□□□ 0.51
CCDC188-202ENST00000444532 HGFP14210 728 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 ABCG1P45844 678 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 NPY2RP49146 381 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 PRLHRP49683 370 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 ARSDP51689 593 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 ACVR1Q04771 509 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 CCDC173Q0VFZ6 552 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 CYP1B1Q16678 543 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 C19orf48Q6RUI8 117 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 PLXDC1Q8IUK5 500 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 PIANPQ8IYJ0 282 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 OR13J1Q8NGT2 312 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 ACTRT1Q8TDG2 376 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 DPH1Q9BZG8 443 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 B3GNT4Q9C0J1 378 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 VPS37BQ9H9H4 285 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 SNX12Q9UMY4 172 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 TCAF1Q9Y4C2 921 aa18.26■□□□□ 0.51
CCDC188-202ENST00000444532 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.25■□□□□ 0.51
CCDC188-202ENST00000444532 CCDC78A2IDD5 438 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 CCDC162PA2VCL2 907 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 UBXN7O94888 489 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 AP2A2O94973 939 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 GSTM1P09488 218 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 TPSB2P20231 275 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 SLC5A2P31639 672 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 CSTF2P33240 577 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCDC188-202ENST00000444532 MAPK9P45984 424 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 GSTM4Q03013 218 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 TPSAB1Q15661 275 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 RPE65Q16518 533 aa18.25■□□□□ 0.51
CCDC188-202ENST00000444532 PCID2Q5JVF3 399 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms