RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 FAM155BO75949 473 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 TRIM16O95361 564 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 CER1O95813 267 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 SHBGP04278 402 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 H2AFXP16104 143 aaPredicted RBP15.53■□□□□ 0.08
USP40-206ENST00000443711 VCLP18206 1134 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 CHRM3P20309 590 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 ABCG1P45844 678 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 SERPINB9P50453 376 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 IFFO1Q0D2I5 559 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 LRP8Q14114 963 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 INSCQ1MX18 579 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 FAM45BPQ6NSW5 357 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 TAOK1Q7L7X3 1001 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 C11orf96Q7Z7L8 435 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 AMZ2Q86W34 360 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 CNPY4Q8N129 248 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 BEND7Q8N7W2 519 aaPredicted RBP15.53■□□□□ 0.08
USP40-206ENST00000443711 GPATCH11Q8N954 259 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 FAM45AQ8TCE6 357 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 ATXN7L3BQ96GX2 97 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 VPS39Q96JC1 886 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 TMEM168Q9H0V1 697 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 TCEAL2Q9H3H9 227 aaPredicted RBP15.53■□□□□ 0.08
USP40-206ENST00000443711 GAREM1Q9H706 876 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 FSCN3Q9NQT6 498 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 SPASTQ9UBP0 616 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 SLC24A2Q9UI40 661 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 ZNF180Q9UJW8 692 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 MTO1Q9Y2Z2 717 aaKnown RBP15.53■□□□□ 0.08
USP40-206ENST00000443711 VWA7Q9Y334 891 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 PCYT1BQ9Y5K3 369 aaPredicted RBP15.53■□□□□ 0.08
USP40-206ENST00000443711 CABIN1Q9Y6J0 2220 aa15.53■□□□□ 0.08
USP40-206ENST00000443711 A0A1B0GTQ1 180 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 IQCF5A8MTL0 148 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 E5RI56 91 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 KPNA5O15131 536 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 YKT6O15498 198 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 NIPSNAP2O75323 286 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 VPS26AO75436 327 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 TCEA3O75764 348 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 ACP5P13686 325 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 ENGP17813 658 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 PBLDP30039 288 aaPredicted RBP15.52■□□□□ 0.08
USP40-206ENST00000443711 LIMK2P53671 638 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 ATXN3P54252 364 aaPredicted RBP15.52■□□□□ 0.08
USP40-206ENST00000443711 ARHGAP8P85298 464 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 CTBSQ01459 385 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 SPEM2Q0P670 501 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 ILF3Q12906 894 aaKnown RBP eCLIP15.52■□□□□ 0.08
USP40-206ENST00000443711 ELOCQ15369 112 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 PLA2G4EQ3MJ16 856 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 PRRT3Q5FWE3 981 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 RBM20Q5T481 1227 aaKnown RBP15.52■□□□□ 0.08
USP40-206ENST00000443711 LGSNQ5TDP6 509 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 HECTD2Q5U5R9 776 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 UGT3A1Q6NUS8 523 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 KRT222Q8N1A0 295 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 SDR16C5Q8N3Y7 309 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 FSTL5Q8N475 847 aaPredicted RBP15.52■□□□□ 0.08
USP40-206ENST00000443711 OR2L2Q8NH16 312 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 GPBAR1Q8TDU6 330 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 DCAKDQ8WVC6 231 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 KCNJ9Q92806 393 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 ELMO2Q96JJ3 720 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 NDNQ99608 321 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 DHRS4Q9BTZ2 278 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 GTPBP2Q9BX10 602 aaKnown RBP15.52■□□□□ 0.08
USP40-206ENST00000443711 GSDMCQ9BYG8 508 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 LATS2Q9NRM7 1088 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 TM7SF3Q9NS93 570 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 KLC4Q9NSK0 619 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 SLC23A2Q9UGH3 650 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 PLAAQ9Y263 795 aa15.52■□□□□ 0.08
USP40-206ENST00000443711 WDFY4Q6ZS81 3184 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 FAM95CA0A1B0GW59 222 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 PIAS2O75928 621 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 KRT38O76015 456 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 ITGA2BP08514 1039 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 ITGB6P18564 788 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 CD9P21926 228 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 CNTFP26441 200 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 GCAP28676 217 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 SKIV2L2P42285 1042 aaKnown RBP15.51■□□□□ 0.07
USP40-206ENST00000443711 CLCNKAP51800 687 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 SLC12A2P55011 1212 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 POU4F1Q01851 419 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 NHLH1Q02575 133 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 C1orf61Q13536 156 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 TMED2Q15363 201 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 CSRP2Q16527 193 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 TCEAL6Q6IPX3 200 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 ADGRD1Q6QNK2 874 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 HM13Q8TCT9 377 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 LKAAEAR1Q8TD35 194 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 LMX1AQ8TE12 382 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 ELMO1Q92556 727 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 TCEAL3Q969E4 200 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 GPR22Q99680 433 aa15.51■□□□□ 0.07
USP40-206ENST00000443711 LRRC61Q9BV99 259 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms