RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 PLA2G4BP0C869 781 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 PPP3CBP16298 524 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 MYL12AP19105 171 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 PTBP1P26599 531 aaKnown RBP eCLIP5.54□□□□□ -1.521e-6■■■■□ 22.6
PTPRC-209ENST00000442510 IL1R2P27930 398 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 MAPK1P28482 360 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 NOS3P29474 1203 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 DDOSTP39656 456 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 NNMTP40261 264 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CBLBQ13191 982 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SCGB2A2Q13296 93 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 KCNJ11Q14654 390 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 PEA15Q15121 130 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 KYAT1Q16773 422 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SLC36A3Q495N2 470 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CDKAL1Q5VV42 579 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CERS6Q6ZMG9 384 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 MTSS1LQ765P7 747 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 GDPD3Q7L5L3 318 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 DYMQ7RTS9 669 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 TRMT11Q7Z4G4 463 aaKnown RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 GPR142Q7Z601 462 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 MCEMP1Q8IX19 187 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 IZUMO1Q8IYV9 350 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 RBFAQ8N0V3 343 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 NAT8LQ8N9F0 302 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ELP5Q8TE02 316 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 FAM84BQ96KN1 310 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SEPHS2Q99611 448 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CITED1Q99966 193 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SORBS1Q9BX66 1292 aaKnown RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 NLNQ9BYT8 704 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 NIPAL2Q9H841 368 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ELP3Q9H9T3 547 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZFP14Q9HCL3 533 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 LRRC4BQ9NT99 713 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CXXC1Q9P0U4 656 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 HCN2Q9UL51 889 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 GSTK1Q9Y2Q3 226 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SRPRBQ9Y5M8 271 aaKnown RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 AATKQ6ZMQ8 1374 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 AQRO60306 1485 aaKnown RBP eCLIP5.54□□□□□ -1.525e-7■■■■■ 27.7
PTPRC-209ENST00000442510 TEX13DA0A0J9YY54 714 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 MEIOCA2RUB1 952 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 EI24O14681 340 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 PER1O15534 1290 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 PRAMEF2O60811 474 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 MED6O75586 246 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 IFNA21P01568 189 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ALDH2P05091 517 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CD36P16671 472 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 EPHA5P54756 1037 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF33AQ06730 810 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF616Q08AN1 781 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 HNRNPDQ14103 355 aaKnown RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 RSU1Q15404 277 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 TRADDQ15628 312 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SMTNL2Q2TAL5 461 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CYP27C1Q4G0S4 372 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 FAM198BQ6UWH4 519 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF705AQ6ZN79 300 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CBR4Q8N4T8 237 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 NDNFQ8TB73 568 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 RHBDF1Q96CC6 855 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 DBNDD2Q9BQY9 259 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CHIAQ9BZP6 476 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 OR51M1Q9H341 326 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CATSPERBQ9H7T0 1116 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 BFARQ9NZS9 450 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 INVSQ9Y283 1065 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 NAIPQ13075 1403 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 A0A087X0M5 115 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 A0A1B0GX30 115 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 hCG_1807616A0A1W2PRN6 198 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SLC35F4A4IF30 521 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 LINC00587B1AMM8 73 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 PRODHO43272 600 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF780AO75290 641 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ERCC1P07992 297 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZSCAN5DPP0CG00 497 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 HLA-EP13747 358 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 RPS19P39019 145 aaKnown RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 RAD52P43351 418 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 KCNJ1P48048 391 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ANXA11P50995 505 aaKnown RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 TAS2R60P59551 318 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 GPLD1P80108 840 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 TNK2Q07912 1038 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CCNIQ14094 377 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 IL18Q14116 193 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 UBAP2LQ14157 1087 aaKnown RBP5.54□□□□□ -1.52
PTPRC-209ENST00000442510 GRM7Q14831 915 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CRY2Q49AN0 593 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF805Q5CZA5 627 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF773Q6PK81 442 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 CEP68Q76N32 757 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 RETREG3Q86VR2 466 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SLC41A1Q8IVJ1 513 aa5.54□□□□□ -1.52
PTPRC-209ENST00000442510 SKA3Q8IX90 412 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms