RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 SSUH2Q9Y2M2 353 aa17.93■□□□□ 0.46
SMPD4-210ENST00000441135 PRKAB1Q9Y478 270 aa17.93■□□□□ 0.46
SMPD4-210ENST00000441135 LOC400499M0QZD8 3231 aa17.93■□□□□ 0.46
SMPD4-210ENST00000441135 IGHV1OR21-1A0A087WYE8 117 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 A6NCN8 305 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 OR5K4A6NMS3 321 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 NVLO15381 856 aaKnown RBP17.92■□□□□ 0.46
SMPD4-210ENST00000441135 GRIA1P42261 906 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 TRA2AQ13595 282 aaKnown RBP eCLIP17.92■□□□□ 0.46
SMPD4-210ENST00000441135 SEPT6Q14141 434 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 KCNJ11Q14654 390 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 USP53Q70EK8 1073 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 ZNF547Q8IVP9 402 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 NXPE1Q8N323 547 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 OR4D9Q8NGE8 314 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 CDKN2AIPNLQ96HQ2 116 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 IL22Q9GZX6 179 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 ARFGAP3Q9NP61 516 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 SARS2Q9NP81 518 aaKnown RBP17.92■□□□□ 0.46
SMPD4-210ENST00000441135 TBC1D29Q9UFV1 150 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 PCYOX1Q9UHG3 505 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 KCNK6Q9Y257 313 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 SLC30A1Q9Y6M5 507 aa17.92■□□□□ 0.46
SMPD4-210ENST00000441135 IGLV3-16A0A075B6K0 115 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 KIR2DS5A0A0G2JLQ3 304 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 A0A0G2JNG1 304 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 EIF4E1BA6NMX2 242 aaKnown RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 KIR2DS3K7RE56 304 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 GPR39O43194 453 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 MTX2O75431 263 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 RALBP11234 206 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 F3P13726 295 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 ZNF7P17097 686 aaPredicted RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 VCLP18206 1134 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 MC4RP32245 332 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 NPY2RP49146 381 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 SARNPP82979 210 aaKnown RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 HHEXQ03014 270 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 CACNG1Q06432 222 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 DMPKQ09013 629 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 GPS1Q13098 491 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 CLN3Q13286 438 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 KIR2DS5Q14953 304 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 C16orf72Q14CZ0 275 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 PCID2Q5JVF3 399 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 ZNF648Q5T619 568 aaPredicted RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 TSTD2Q5T7W7 516 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 LRRC8BQ6P9F7 803 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 IYDQ6PHW0 289 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 WASH2PQ6VEQ5 465 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 C11orf96Q7Z7L8 435 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 LSM14AQ8ND56 463 aaKnown RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 OR10G6Q8NH81 332 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 SH3KBP1Q96B97 665 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 BBC3Q96PG8 261 aaPredicted RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 SLC38A3Q99624 504 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 B3GNT4Q9C0J1 378 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 WASH6PQ9NQA3 447 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 PIH1D1Q9NWS0 290 aaKnown RBP17.91■□□□□ 0.46
SMPD4-210ENST00000441135 BFARQ9NZS9 450 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 CRLS1Q9UJA2 301 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 TCAF1Q9Y4C2 921 aa17.91■□□□□ 0.46
SMPD4-210ENST00000441135 BPTFQ12830 3046 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 IGHV5-10-1A0A0J9YXX1 117 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 CFAP99D6REC4 459 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 CCDC188H7C350 402 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 TK2O00142 265 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 ATXN7O15265 892 aaPredicted RBP17.9■□□□□ 0.46
SMPD4-210ENST00000441135 FANCGO15287 622 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 DUX1O43812 170 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 EML2O95834 649 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 MLNP12872 115 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 MSH3P20585 1137 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 CSF2RBP32927 897 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 CA5AP35218 305 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 LIMK2P53671 638 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 ETF1P62495 437 aaKnown RBP17.9■□□□□ 0.46
SMPD4-210ENST00000441135 VAC14Q08AM6 782 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 INSCQ1MX18 579 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 BCL7AQ4VC05 210 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 TMEM164Q5U3C3 297 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 CRTC3Q6UUV7 619 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 ZNF534Q76KX8 674 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 SLC9B2Q86UD5 537 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 TRAPPC5Q8IUR0 188 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 RASGEF1AQ8N9B8 481 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 MCUQ8NE86 351 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 PPHLN1Q8NEY8 458 aaKnown RBP17.9■□□□□ 0.46
SMPD4-210ENST00000441135 OR13J1Q8NGT2 312 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 SNRNP27Q8WVK2 155 aaKnown RBP17.9■□□□□ 0.46
SMPD4-210ENST00000441135 AHCYL2Q96HN2 611 aaKnown RBP17.9■□□□□ 0.46
SMPD4-210ENST00000441135 LINC00615Q96LM1 132 aaPredicted RBP17.9■□□□□ 0.46
SMPD4-210ENST00000441135 CCDC74BQ96LY2 380 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 COPS8Q99627 209 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 ZMYND15Q9H091 742 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 MRM3Q9HC36 420 aaKnown RBP17.9■□□□□ 0.46
SMPD4-210ENST00000441135 CPNE5Q9HCH3 593 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 ZDHHC3Q9NYG2 299 aa17.9■□□□□ 0.46
SMPD4-210ENST00000441135 KIF26BQ2KJY2 2108 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms