RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 IGSF11Q5DX21 431 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 GAGE2AQ6NT46 116 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 C16orf54Q6UWD8 224 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 KCTD8Q6ZWB6 473 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 HAUS6Q7Z4H7 955 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 DSG4Q86SJ6 1040 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 DNAAF5Q86Y56 855 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 RFLNBQ8N5W9 214 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 MAB21L3Q8N8X9 362 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 TBC1D16Q8TBP0 767 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 OXNAD1Q96HP4 312 aaPredicted RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 POLR3CQ9BUI4 534 aaPredicted RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 SPATC1LQ9H0A9 340 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 SEMA6AQ9H2E6 1030 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 CPSF2Q9P2I0 782 aaKnown RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 LARSQ9P2J5 1176 aaKnown RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 GAGE2DQ9UEU5 116 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 POLG2Q9UHN1 485 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 ZNF711Q9Y462 761 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 YIPF1Q9Y548 306 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 OR2M5A3KFT3 312 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 C15orf62A8K5M9 175 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 C16orf97H3BN30 126 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 ERAL1O75616 437 aaKnown RBP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 WISP2O76076 250 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 BMP10O95393 424 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 F7P08709 466 aaPredicted RBP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 CETPP11597 493 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 AKR1B1P15121 316 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 ZNF23P17027 643 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 HOXB6P17509 224 aaKnown RBP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 GM2AP17900 193 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 RAD52P43351 418 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 ARCN1P48444 511 aaKnown RBP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 LMAN1P49257 510 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 MLLT10P55197 1068 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 IFI35P80217 286 aaPredicted RBP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 ILF3Q12906 894 aaKnown RBP eCLIP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 ZNF718Q3SXZ3 478 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 ZNF672Q499Z4 452 aaPredicted RBP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 SIRPB2Q5JXA9 342 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 PDSS1Q5T2R2 415 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 ALS2CLQ60I27 953 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 TMCO3Q6UWJ1 677 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 C18orf65Q6ZTR6 163 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 FOXL2NBQ6ZUU3 175 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 C9orf139Q6ZV77 190 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 KBTBD3Q8NAB2 608 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 RDM1Q8NG50 284 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 LMLNQ96KR4 655 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 MRPL1Q9BYD6 325 aaKnown RBP4.69□□□□□ -1.66
PFDN4-202ENST00000441080 DONSONQ9NYP3 566 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 LRP12Q9Y561 859 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 PASKQ96RG2 1323 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 TAF1P21675 1872 aa4.69□□□□□ -1.66
PFDN4-202ENST00000441080 LOC102723996A0A087X1L8 192 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 A6NL46 340 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 CAPN9O14815 690 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 ADAM20O43506 726 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 ZWINTO95229 277 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 KRT19P08727 400 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 NR2F1P10589 423 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 MCCP23508 829 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 GRAPQ13588 217 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 BECN1Q14457 450 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 BMP2KLQ5H9B9 411 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 MFSD4BQ5TF39 518 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 DHRS7BQ6IAN0 325 aaPredicted RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 ADGRA1Q86SQ6 560 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 LDB1Q86U70 411 aaPredicted RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 MINDY1Q8N5J2 469 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 METTL27Q8N6F8 245 aaPredicted RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 RBM15BQ8NDT2 890 aaKnown RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 OR13A1Q8NGR1 328 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 PTPMT1Q8WUK0 201 aaPredicted RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 ZNF622Q969S3 477 aaKnown RBP eCLIP4.68□□□□□ -1.661e-12■□□□□ 11.2
PFDN4-202ENST00000441080 ZNF583Q96ND8 569 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 SLC22A12Q96S37 553 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 ABHD1Q96SE0 405 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 CDRT15Q96T59 188 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 LRRC1Q9BTT6 524 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 PPIL3Q9H2H8 161 aaKnown RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 MMP27Q9H306 513 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 KCNK15Q9H427 330 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 DENND2DQ9H6A0 471 aaPredicted RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 TRPC7Q9HCX4 862 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 ANKEF1Q9NU02 776 aa4.68□□□□□ -1.66
PFDN4-202ENST00000441080 PPIEQ9UNP9 301 aaKnown RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 MAGED1Q9Y5V3 778 aaPredicted RBP4.68□□□□□ -1.66
PFDN4-202ENST00000441080 CTAGE9A4FU28 777 aa4.67□□□□□ -1.66
PFDN4-202ENST00000441080 MAGEB17A8MXT2 336 aa4.67□□□□□ -1.66
PFDN4-202ENST00000441080 PRSS44E7EML9 344 aa4.67□□□□□ -1.66
PFDN4-202ENST00000441080 H0YIN7 160 aa4.67□□□□□ -1.66
PFDN4-202ENST00000441080 SH2B2O14492 632 aaPredicted RBP4.67□□□□□ -1.66
PFDN4-202ENST00000441080 DVL1O14640 695 aa4.67□□□□□ -1.66
PFDN4-202ENST00000441080 FIBPO43427 364 aa4.67□□□□□ -1.66
PFDN4-202ENST00000441080 KRT36O76013 467 aa4.67□□□□□ -1.66
PFDN4-202ENST00000441080 PDE9AO76083 593 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms