RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CLCN4P51793 760 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 CDH15P55291 814 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 NTHL1P78549 312 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TXNL4AP83876 142 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 TIAL1Q01085 375 aaKnown RBP eCLIP14□□□□□ -0.17
LIMD1-202ENST00000440097 ANKDD1AQ495B1 522 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TMEM240Q5SV17 173 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 CLEC6AQ6EIG7 209 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 ELMSAN1Q6PJG2 1045 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TNFRSF12AQ9NP84 129 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TDP1Q9NUW8 608 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 CNOT11Q9UKZ1 510 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 MYRFQ9Y2G1 1151 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 PTPRSQ13332 1948 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 IQCF5A8MTL0 148 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 ACOT8O14734 319 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 PER2O15055 1255 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 PRAMEF1O95521 474 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 PTPN2P17706 415 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 IMPDH1P20839 514 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 WEE1P30291 646 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 HMGCLP35914 325 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 CBX2Q14781 532 aaPredicted RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 PITRM1Q5JRX3 1037 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 DGKKQ5KSL6 1271 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 RBM23Q86U06 439 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 C7orf61Q8IZ16 206 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 ING5Q8WYH8 240 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 ZNF597Q96LX8 424 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TMEM79Q9BSE2 394 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 MAGEE1Q9HCI5 957 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 PFDN4Q9NQP4 134 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 IL17CQ9P0M4 197 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 DNMT3BQ9UBC3 853 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 GALPQ9UBC7 116 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TRIOO75962 3097 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 FZD6O60353 706 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 CLDN7O95471 211 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 IRS1P35568 1242 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 CCR3P51677 355 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 HERVK_113P63132 956 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ART3Q13508 389 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 TSNQ15631 228 aaKnown RBP13.99□□□□□ -0.17
LIMD1-202ENST00000440097 KRT80Q6KB66 452 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 CARM1Q86X55 608 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 MYO1HQ8N1T3 1032 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 OR2AP1Q8NGE2 309 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 STAG3L4Q8TBR4 150 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 PIH1D2Q8WWB5 315 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ASIC4Q96FT7 647 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ERVK-6Q9BXR3 956 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 POPDC3Q9HBV1 291 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 EBF1Q9UH73 591 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 FOXD2O60548 495 aaPredicted RBP13.99□□□□□ -0.17
LIMD1-202ENST00000440097 EPCAMP16422 314 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ITGB6P18564 788 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 MAPK8P45983 427 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 NUP107P57740 925 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 SNRPD1P62314 119 aaKnown RBP13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ZNF678Q5SXM1 525 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 PTRHD1Q6GMV3 140 aaKnown RBP13.99□□□□□ -0.17
LIMD1-202ENST00000440097 PSRC1Q6PGN9 363 aaPredicted RBP13.99□□□□□ -0.17
LIMD1-202ENST00000440097 NAT16Q8N8M0 369 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 EID2BQ96D98 161 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 RMND5BQ96G75 393 aaPredicted RBP13.99□□□□□ -0.17
LIMD1-202ENST00000440097 DCUN1D5Q9BTE7 237 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 MCOLN1Q9GZU1 580 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ZDHHC6Q9H6R6 413 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ASB8Q9H765 288 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 OLAHQ9NV23 265 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 UTP6Q9NYH9 597 aaKnown RBP13.99□□□□□ -0.17
LIMD1-202ENST00000440097 SLC25A13Q9UJS0 675 aa13.99□□□□□ -0.17
LIMD1-202ENST00000440097 ANKRD12Q6UB98 2062 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 KANSL1LA0AUZ9 987 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 NPEPPSL1A6NEC2 478 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 LRRC14BA6NHZ5 514 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 CDC7O00311 574 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 WISP3O95389 354 aaPredicted RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 PORP16435 677 aaPredicted RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 RPL10P27635 214 aaKnown RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 HNF1BP35680 557 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 PPARGP37231 505 aaPredicted RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 SUOXP51687 545 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 PHEXP78562 749 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 CACNG1Q06432 222 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 GRASPQ7Z6J2 395 aaPredicted RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 CLVS1Q8IUQ0 354 aaPredicted RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 FBXO39Q8N4B4 442 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 SPPL3Q8TCT6 385 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 MYLIPQ8WY64 445 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 LRTOMTQ8WZ04 291 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 LINGO1Q96FE5 620 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 SLC30A3Q99726 388 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 NPAS2Q99743 824 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 LINC00597Q9H2U6 94 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 IRAK3Q9Y616 596 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 A0A0J9YYE9 177 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 PLOD2O00469 737 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms