RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZHX2Q9Y6X8 837 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 A0A087WW49 117 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 A0A1W2PRG0 241 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 EIF4E1BA6NMX2 242 aaKnown RBP3.23□□□□□ -1.89
PTPN4-205ENST00000433888 C15orf62A8K5M9 175 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 ATP2A1O14983 1001 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 PI15O43692 258 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 CSPG5O95196 566 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 GCNT3O95395 438 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 RAF1P04049 648 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 POLBP06746 335 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 EIF3BP55884 814 aaKnown RBP3.23□□□□□ -1.89
PTPN4-205ENST00000433888 PNLIPRP3Q17RR3 467 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 GTDC1Q4AE62 458 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 SOWAHCQ53LP3 525 aaPredicted RBP3.23□□□□□ -1.89
PTPN4-205ENST00000433888 ALS2CLQ60I27 953 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 TSSK4Q6SA08 328 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 SDCCAG8Q86SQ7 713 aaPredicted RBP3.23□□□□□ -1.89
PTPN4-205ENST00000433888 ERC1Q8IUD2 1116 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 C1orf52Q8N6N3 182 aaKnown RBP3.23□□□□□ -1.89
PTPN4-205ENST00000433888 NFKBIDQ8NI38 313 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 SMPDL3BQ92485 455 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 RNF125Q96EQ8 232 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 SAAL1Q96ER3 474 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 MMABQ96EY8 250 aaPredicted RBP3.23□□□□□ -1.89
PTPN4-205ENST00000433888 UBXN10Q96LJ8 280 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 GFI1Q99684 422 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 HERPUD2Q9BSE4 406 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 TMEM39BQ9GZU3 492 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 PCDHB16Q9NRJ7 776 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 FAM120CQ9NX05 1096 aaKnown RBP3.23□□□□□ -1.89
PTPN4-205ENST00000433888 MTMR10Q9NXD2 777 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 COQ3Q9NZJ6 369 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 MAU2Q9Y6X3 613 aa3.23□□□□□ -1.89
PTPN4-205ENST00000433888 KANSL1LA0AUZ9 987 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 IFRD1O00458 451 aaPredicted RBP3.22□□□□□ -1.89
PTPN4-205ENST00000433888 SH3BP5O60239 455 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 GPR137BO60478 399 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 PAGE4O60829 102 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 TRMUO75648 421 aaKnown RBP3.22□□□□□ -1.89
PTPN4-205ENST00000433888 BMP10O95393 424 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 EDN1P05305 212 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 HMBSP08397 361 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 HRH2P25021 359 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 PRCPP42785 496 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 CTCFP49711 727 aaPredicted RBP3.22□□□□□ -1.89
PTPN4-205ENST00000433888 THOP1P52888 689 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 TRPC3Q13507 836 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 CDC73Q6P1J9 531 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 INO80CQ6PI98 192 aaPredicted RBP3.22□□□□□ -1.89
PTPN4-205ENST00000433888 TRIM65Q6PJ69 517 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 DOK6Q6PKX4 331 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 ISCA2Q86U28 154 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 AGAP3Q96P47 875 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 SLC25A18Q9H1K4 315 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 SCPEP1Q9HB40 452 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 ECHDC1Q9NTX5 307 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 KLK13Q9UKR3 277 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 PNMA2Q9UL42 364 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 NAALADL1Q9UQQ1 740 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 CYP46A1Q9Y6A2 500 aa3.22□□□□□ -1.89
PTPN4-205ENST00000433888 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 IGHV4-4A0A075B6R2 117 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 IGHV4-61A0A0C4DH41 118 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 OR2M5A3KFT3 312 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 HOXC11O43248 304 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-205ENST00000433888 TGFB1I1O43294 461 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 IGHV4-59P01825 116 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 HSD3B1P14060 373 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 NFKBIAP25963 317 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 EPHA8P29322 1005 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-205ENST00000433888 CEACAM8P31997 349 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-205ENST00000433888 PAFAH1B1P43034 410 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 SLC6A12P48065 614 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 SNRPD1P62314 119 aaKnown RBP3.21□□□□□ -1.9
PTPN4-205ENST00000433888 MRPS34P82930 218 aaKnown RBP3.21□□□□□ -1.9
PTPN4-205ENST00000433888 SP3Q02447 781 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 RIGQ13278 110 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 MFAP5Q13361 173 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 P2RY6Q15077 328 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 ZNF774Q6NX45 483 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 GSTA5Q7RTV2 222 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 CDC20BQ86Y33 519 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 ABCA7Q8IZY2 2146 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 GCC1Q96CN9 775 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 SEPT5Q99719 369 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-205ENST00000433888 DLGAP2Q9P1A6 1054 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 RCC2Q9P258 522 aaKnown RBP3.21□□□□□ -1.9
PTPN4-205ENST00000433888 CAMK2AQ9UQM7 478 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 RABGAP1Q9Y3P9 1069 aa3.21□□□□□ -1.9
PTPN4-205ENST00000433888 IGLV9-49A0A0B4J1Y8 123 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 PLPP2O43688 288 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 ZNF217O75362 1048 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 CBLP22681 906 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 ABCD3P28288 659 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 ICAM3P32942 547 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 F2RL1P55085 397 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 CD81P60033 236 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 TAF12Q16514 161 aa3.2□□□□□ -1.9
PTPN4-205ENST00000433888 GLIPR1L2Q4G1C9 344 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms