RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 DMPKQ09013 629 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 GPR18Q14330 331 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 SIX1Q15475 284 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-204ENST00000430682 PARP6Q2NL67 630 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 FNBP1LQ5T0N5 605 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 ANKS6Q68DC2 871 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 WASH2PQ6VEQ5 465 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 RNF10Q8N5U6 811 aaKnown RBP12.28□□□□□ -0.44
SMPD4-204ENST00000430682 AGBL5Q8NDL9 886 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 RSC1A1Q92681 617 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 AHCYL2Q96HN2 611 aaKnown RBP12.28□□□□□ -0.44
SMPD4-204ENST00000430682 DNAJC1Q96KC8 554 aaKnown RBP12.28□□□□□ -0.44
SMPD4-204ENST00000430682 TAAR9Q96RI9 348 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 CCNL2Q96S94 520 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-204ENST00000430682 NRTNQ99748 197 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 SPRY4Q9C004 299 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 SLC40A1Q9NP59 571 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 WASH6PQ9NQA3 447 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■■■□□ 18.4
SMPD4-204ENST00000430682 PCDHGA3Q9Y5H0 932 aa12.28□□□□□ -0.44
SMPD4-204ENST00000430682 MN1Q10571 1320 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-204ENST00000430682 CCDC78A2IDD5 438 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 C2orf81A6NN90 581 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 PPFIA2O75334 1257 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 STK10O94804 968 aaKnown RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 VIPP01282 170 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 C9P02748 559 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 SLC2A4P14672 509 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 CSTF2P33240 577 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 TNNT3P45378 269 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 PPM1FP49593 454 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 UCNP55089 124 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 CCZ1BP86790 482 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 CCZ1P86791 482 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 ITGA9Q13797 1035 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 GTF2H3Q13889 308 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 PRPSAP1Q14558 356 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 RPE65Q16518 533 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 MEI1Q5TIA1 1274 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 ZDHHC20Q5W0Z9 365 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 DUS1LQ6P1R4 473 aaKnown RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 CCDC81Q6ZN84 652 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 ARHGEF18Q6ZSZ5 1173 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 AMZ2Q86W34 360 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 FAM129CQ86XR2 697 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 SLC13A5Q86YT5 568 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 TTC13Q8NBP0 860 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 C1orf54Q8WWF1 131 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 NKD1Q969G9 470 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 SH3KBP1Q96B97 665 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 RTP4Q96DX8 246 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 TTC25Q96NG3 672 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 INSM2Q96T92 566 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 DPYSL5Q9BPU6 564 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 UCK1Q9HA47 277 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 SIDT1Q9NXL6 827 aaKnown RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 SLC39A1Q9NY26 324 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 FAM8A1Q9UBU6 413 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 CFAP20Q9Y6A4 193 aaKnown RBP12.27□□□□□ -0.45
SMPD4-204ENST00000430682 SEC16AO15027 2179 aa12.27□□□□□ -0.45
SMPD4-204ENST00000430682 TRBV5-4A0A0C4DH59 114 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 GOLGA6L9A6NEM1 432 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 B4E171 279 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 ZW10O43264 779 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 LIASO43766 372 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 UBXN7O94888 489 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 AKT1P31749 480 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 MC4RP32245 332 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 TSPAN7P41732 249 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 SH3BP2P78314 561 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 CYP4F2P78329 520 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 MC2RQ01718 297 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 LY6DQ14210 128 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 POU6F1Q14863 301 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 ZNF658BQ4V348 819 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-204ENST00000430682 METRNLQ641Q3 311 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
SMPD4-204ENST00000430682 TRIM48Q8IWZ4 208 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 PIANPQ8IYJ0 282 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 NXPE1Q8N323 547 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 C9orf72Q96LT7 481 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 TGM7Q96PF1 710 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 FERMT1Q9BQL6 677 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-204ENST00000430682 B3GNT4Q9C0J1 378 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 ZMYND15Q9H091 742 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 STN1Q9H668 368 aaKnown RBP12.26□□□□□ -0.45
SMPD4-204ENST00000430682 NLE1Q9NVX2 485 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-204ENST00000430682 CCDC88CQ9P219 2028 aa12.26□□□□□ -0.45
SMPD4-204ENST00000430682 FER1L5A0AVI2 2057 aa12.25□□□□□ -0.45
SMPD4-204ENST00000430682 MGAT4DA6NG13 374 aa12.25□□□□□ -0.45
SMPD4-204ENST00000430682 OR51F1A6NGY5 319 aa12.25□□□□□ -0.45
SMPD4-204ENST00000430682 CAPN5O15484 640 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-204ENST00000430682 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
SMPD4-204ENST00000430682 CRTAMO95727 393 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms