RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 KRT19P08727 400 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 CD63P08962 238 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 FAM228BP0C875 321 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 SP9P0CG40 484 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 PRR23D2P0DMB1 279 aaPredicted RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 GZMAP12544 262 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 P4HA1P13674 534 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 HOXB8P17481 243 aaPredicted RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 TPH1P17752 444 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 PBX3P40426 434 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 GPD2P43304 727 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 ELAVL2Q12926 359 aaKnown RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 PTP4A2Q12974 167 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 KCNC3Q14003 757 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 ERV3-1Q14264 604 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 CLCA4Q14CN2 919 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 SLC18A3Q16572 532 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 SFMBT2Q5VUG0 894 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 DAB2IPQ5VWQ8 1189 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 FUT10Q6P4F1 479 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 MZT2AQ6P582 158 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 TMEM270Q6UE05 265 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 LCLAT1Q6UWP7 414 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 YAF2Q8IY57 180 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 MMP21Q8N119 569 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 COLGALT1Q8NBJ5 622 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 ACRBPQ8NEB7 543 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 CCDC112Q8NEF3 446 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 APPL2Q8NEU8 664 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF397Q8NF99 534 aaPredicted RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 LNX1Q8TBB1 728 aaPredicted RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 SLC20A1Q8WUM9 679 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 SLC35F5Q8WV83 523 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 EIF3CQ99613 913 aaKnown RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 HNRNPABQ99729 332 aaKnown RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 BAG1Q99933 345 aaPredicted RBP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 COLEC11Q9BWP8 271 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 ISCUQ9H1K1 167 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 LHX5Q9H2C1 402 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 HAUS4Q9H6D7 363 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 USP29Q9HBJ7 922 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 CSNK1G1Q9HCP0 422 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 TMEM30AQ9NV96 361 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 ZIM2Q9NZV7 527 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 MTRRQ9UBK8 725 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 DKK4Q9UBT3 224 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 CYTH4Q9UIA0 394 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 SF3B1O75533 1304 aaKnown RBP eCLIP5.64□□□□□ -1.51
C9orf3-205ENST00000427193 TSC2P49815 1807 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 ITPR1Q14643 2758 aa5.64□□□□□ -1.51
C9orf3-205ENST00000427193 USP9XQ93008 2570 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 IGSF10Q6WRI0 2623 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 hCG_2014768A0A024R1R8 64 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 FAM92AA1XBS5 289 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 MYBPHLA2RUH7 354 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CYSRT1A8MQ03 144 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 HHLA1C9JL84 531 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 I3L4J1 428 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 RAB27BO00194 218 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 SLC30A4O14863 429 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 PER2O15055 1255 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 TRAPPC3O43617 180 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 SNX2O60749 519 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 HUS1O60921 280 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 LSM8O95777 96 aaKnown RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CALCAP01258 141 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 VDRP11473 427 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 ODC1P11926 461 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 SKILP12757 684 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 PPM1AP35813 382 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 GNL1P36915 607 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 GABRB2P47870 512 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 OR1G1P47890 313 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CPA2P48052 419 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 ALDH7A1P49419 539 aaKnown RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 GSCP56915 257 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 YWHAEP62258 255 aaKnown RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 TNNC1P63316 161 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 UBE3AQ05086 875 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 GPR17Q13304 367 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 BTG3Q14201 252 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 MTF1Q14872 753 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 DUSP6Q16828 381 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CFAP221Q4G0U5 840 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 C3orf38Q5JPI3 329 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CXorf57Q6NSI4 855 aaKnown RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 ANKRD54Q6NXT1 300 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CYP26C1Q6V0L0 522 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CACNA2D4Q7Z3S7 1137 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 TMEM110Q86TL2 294 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 TTC30AQ86WT1 665 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 PHF13Q86YI8 300 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 ADGRF2Q8IZF7 708 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 C11orf44Q8N8P7 122 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 C12orf29Q8N999 325 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 FAM71DQ8N9W8 422 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 ZMIZ2Q8NF64 920 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 KIAA1524Q8TCG1 905 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 POF1BQ8WVV4 589 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms