RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 BTBD1Q9H0C5 482 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 THAP1Q9NVV9 213 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 RNF112Q9ULX5 631 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 SYCE1LA8MT33 242 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 TSPAN12O95859 305 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 CBSLP0DN79 551 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 CCR7P32248 378 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 CBSP35520 551 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 SLC1A6P48664 564 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 TMEM220Q6QAJ8 160 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 TRIM67Q6ZTA4 783 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 RASGEF1AQ8N9B8 481 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 PLA2G15Q8NCC3 412 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 OR2AG1Q9H205 316 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 EPHX3Q9H6B9 360 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 ITM2CQ9NQX7 267 aa14.89□□□□□ -0.03
GINS3-203ENST00000426538 PIKFYVEQ9Y2I7 2098 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 LRRC72A6NJI9 287 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 VEGFDO43915 354 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 KERAO60938 352 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 IPO13O94829 963 aaKnown RBP14.88□□□□□ -0.03
GINS3-203ENST00000426538 AOAHP28039 575 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 MAT2AP31153 395 aaKnown RBP14.88□□□□□ -0.03
GINS3-203ENST00000426538 KCNC1P48547 511 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 HSPA14Q0VDF9 509 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 INPP5AQ14642 412 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 OR4D1Q15615 310 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 TSNQ15631 228 aaKnown RBP14.88□□□□□ -0.03
GINS3-203ENST00000426538 TMEM259Q4ZIN3 620 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 ACSBG2Q5FVE4 666 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 NAPRTQ6XQN6 538 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 TRIM74Q86UV6 250 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 CRLF3Q8IUI8 442 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 PPP4R1Q8TF05 950 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 ASZ1Q8WWH4 475 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 ELMO1Q92556 727 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 EXT2Q93063 718 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 ZNF514Q96K75 400 aaPredicted RBP14.88□□□□□ -0.03
GINS3-203ENST00000426538 FOXQ1Q9C009 403 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 SGK2Q9HBY8 427 aa14.88□□□□□ -0.03
GINS3-203ENST00000426538 MBD1Q9UIS9 605 aaPredicted RBP14.88□□□□□ -0.03
GINS3-203ENST00000426538 NPEPPSL1A6NEC2 478 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 EIF3FO00303 357 aaPredicted RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 CDC7O00311 574 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 TROVE2P10155 538 aaKnown RBP eCLIP14.87□□□□□ -0.03
GINS3-203ENST00000426538 ENO3P13929 434 aaPredicted RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 PRLHRP49683 370 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 NAGLUP54802 743 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 DNAJB13P59910 316 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 BOP1Q14137 746 aaKnown RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 CFAP157Q5JU67 520 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 PLEKHS1Q5SXH7 462 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 ANO7Q6IWH7 933 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 RAB44Q7Z6P3 723 aaPredicted RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 PIGWQ7Z7B1 504 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 ADGRG6Q86SQ4 1221 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 HEATR4Q86WZ0 1026 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 BEND7Q8N7W2 519 aaPredicted RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 TSTD1Q8NFU3 115 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 OR2T34Q8NGX1 318 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 PHF21BQ96EK2 531 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 C7orf26Q96N11 449 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 ATOH8Q96SQ7 321 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 CCM2Q9BSQ5 444 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 GATA5Q9BWX5 397 aaPredicted RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 MBNL1Q9NR56 388 aaKnown RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 NCKIPSDQ9NZQ3 722 aa14.87□□□□□ -0.03
GINS3-203ENST00000426538 TSR3Q9UJK0 312 aaKnown RBP14.87□□□□□ -0.03
GINS3-203ENST00000426538 NEMP2A6NFY4 417 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 A8MT66 165 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 TMEM114B3SHH9 223 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 SUPT3HB4E1H0 165 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 SLC31A1O15431 190 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 SGTAO43765 313 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 SNNO75324 88 aaPredicted RBP14.86□□□□□ -0.03
GINS3-203ENST00000426538 SUPT3HO75486 399 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 GFAPP14136 432 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 ACSL1P33121 698 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 CTSCP53634 463 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 ABCE1P61221 599 aaKnown RBP14.86□□□□□ -0.03
GINS3-203ENST00000426538 CDK3Q00526 305 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 SF3A3Q12874 501 aaKnown RBP eCLIP14.86□□□□□ -0.03
GINS3-203ENST00000426538 FZD5Q13467 585 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 FGL2Q14314 439 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 IRF4Q15306 451 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 FRA10AC1Q70Z53 315 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 PIWIL4Q7Z3Z4 852 aaKnown RBP14.86□□□□□ -0.03
GINS3-203ENST00000426538 ADAMTSL2Q86TH1 951 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 GPSM1Q86YR5 675 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 TRAPPC5Q8IUR0 188 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 CCNYL1Q8N7R7 359 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 ANKS4BQ8N8V4 417 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 TP53I13Q8NBR0 393 aaPredicted RBP14.86□□□□□ -0.03
GINS3-203ENST00000426538 ASB12Q8WXK4 309 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 FUBP1Q96AE4 644 aaKnown RBP14.86□□□□□ -0.03
GINS3-203ENST00000426538 COX14Q96I36 57 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 FAM126AQ9BYI3 521 aaPredicted RBP14.86□□□□□ -0.03
GINS3-203ENST00000426538 TRIM55Q9BYV6 548 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 WDR26Q9H7D7 661 aa14.86□□□□□ -0.03
GINS3-203ENST00000426538 CYP4F12Q9HCS2 524 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms