RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 AMZ2Q86W34 360 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 SERPINA9Q86WD7 417 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 LILRA3Q8N6C8 439 aaPredicted RBP13.38□□□□□ -0.27
SNX3-204ENST00000426155 OR13J1Q8NGT2 312 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 GPR150Q8NGU9 434 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 STYXQ8WUJ0 223 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 HNRNPLLQ8WVV9 542 aaKnown RBP13.38□□□□□ -0.27
SNX3-204ENST00000426155 JPH3Q8WXH2 748 aaPredicted RBP13.38□□□□□ -0.27
SNX3-204ENST00000426155 CDKN2AIPNLQ96HQ2 116 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 NAF1Q96HR8 494 aaKnown RBP13.38□□□□□ -0.27
SNX3-204ENST00000426155 PBKQ96KB5 322 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 COPS8Q99627 209 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 PISDQ9UG56 409 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 LOXL2Q9Y4K0 774 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 ZFYVE26Q68DK2 2539 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 TRBV5-4A0A0C4DH59 114 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 CCDC162PA2VCL2 907 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 H7C0S8 307 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 PGRMC1O00264 195 aaKnown RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 PLD2O14939 933 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 KIF5CO60282 957 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 DXOO77932 396 aaKnown RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 TNFSF15O95150 251 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 SLC2A4P14672 509 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 IDSP22304 550 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 MSNP26038 577 aaKnown RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 ACRV1P26436 265 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 ITPKBP27987 946 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 SESN2P58004 480 aaPredicted RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 CCDC173Q0VFZ6 552 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 DBN1Q16643 649 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 TAS2R42Q7RTR8 314 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 FBXO39Q8N4B4 442 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 SNIP1Q8TAD8 396 aaKnown RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 MAGOHBQ96A72 148 aaKnown RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 ULK4Q96C45 1275 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 TMEM74Q96NL1 305 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 STN1Q9H668 368 aaKnown RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 PCDHGA8Q9Y5G5 932 aa13.37□□□□□ -0.27
SNX3-204ENST00000426155 CFAP20Q9Y6A4 193 aaKnown RBP13.37□□□□□ -0.27
SNX3-204ENST00000426155 IGLV3-16A0A075B6K0 115 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 HEATR9A2RTY3 570 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 OR5K4A6NMS3 321 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 DUX1O43812 170 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 VIPP01282 170 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 THRAP10827 490 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 VCLP18206 1134 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 XRCC1P18887 633 aaPredicted RBP13.36□□□□□ -0.27
SNX3-204ENST00000426155 RBMS1P29558 406 aaKnown RBP13.36□□□□□ -0.27
SNX3-204ENST00000426155 FOXN2P32314 431 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 EIF2S3P41091 472 aaKnown RBP13.36□□□□□ -0.27
SNX3-204ENST00000426155 LIMK2P53671 638 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 GPLD1P80108 840 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 DMPKQ09013 629 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 GPR18Q14330 331 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 COL28A1Q2UY09 1125 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 BCL7AQ4VC05 210 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 SNAP47Q5SQN1 464 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 TSTD2Q5T7W7 516 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 AGAP9Q5VTM2 703 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 ANKRD22Q5VYY1 191 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 ABRAXAS1Q6UWZ7 409 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 TRIM48Q8IWZ4 208 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 CLDN19Q8N6F1 224 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 OR10G6Q8NH81 332 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 NCSTNQ92542 709 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 FGF11Q92914 225 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 PMEPA1Q969W9 287 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 CXorf40BQ96DE9 158 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 DCUN1D1Q96GG9 259 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 AHCYL2Q96HN2 611 aaKnown RBP13.36□□□□□ -0.27
SNX3-204ENST00000426155 ZNF578Q96N58 590 aaPredicted RBP13.36□□□□□ -0.27
SNX3-204ENST00000426155 SLC46A1Q96NT5 459 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 RANBP9Q96S59 729 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 C19orf43Q9BQ61 176 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 WWP1Q9H0M0 922 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 EIF2B3Q9NR50 452 aaKnown RBP13.36□□□□□ -0.27
SNX3-204ENST00000426155 ZDHHC3Q9NYG2 299 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 OGFRQ9NZT2 677 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 KLHL3Q9UH77 587 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 SNX12Q9UMY4 172 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 TCAF1Q9Y4C2 921 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 PRSS21Q9Y6M0 314 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 SDK2Q58EX2 2172 aa13.36□□□□□ -0.27
SNX3-204ENST00000426155 A0A087WV48 116 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 MGAT4DA6NG13 374 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 LILRA5A6NI73 299 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 A8MU76 341 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 CDRT15L2A8MXV6 281 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 FANCGO15287 622 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 TMEM63AO94886 807 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 GAS8O95995 478 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 GOT2P00505 430 aaKnown RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 KRT14P02533 472 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 JMJD7P0C870 316 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 CCL4P13236 92 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 ATP1B2P14415 290 aaPredicted RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 TYRP1P17643 537 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms