RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TBC1D29Q9UFV1 150 aa24.08■■□□□ 1.44
VEGFA-209ENST00000425836 U3KQA8 63 aa24.08■■□□□ 1.44
VEGFA-209ENST00000425836 MGAT4DA6NG13 374 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 PRMT5O14744 637 aaPredicted RBP24.07■■□□□ 1.44
VEGFA-209ENST00000425836 GIPC1O14908 333 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 CEACAM1P13688 526 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 PBLDP30039 288 aaPredicted RBP24.07■■□□□ 1.44
VEGFA-209ENST00000425836 DMPKQ09013 629 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 FRG1Q14331 258 aaKnown RBP24.07■■□□□ 1.44
VEGFA-209ENST00000425836 TRMT10BQ6PF06 316 aaKnown RBP24.07■■□□□ 1.44
VEGFA-209ENST00000425836 LMNTD2Q8IXW0 634 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 IFT20Q8IY31 132 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 OR2L2Q8NH16 312 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 ZDHHC1Q8WTX9 485 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 P2RY12Q9H244 342 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 OSGEPL1Q9H4B0 414 aa24.07■■□□□ 1.44
VEGFA-209ENST00000425836 TDRD6O60522 2096 aaKnown RBP24.07■■□□□ 1.44
VEGFA-209ENST00000425836 B4DGG1 531 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 NOBOXO60393 691 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 EML2O95834 649 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 S1PR4O95977 384 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 VCLP18206 1134 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 MAGEA4P43358 317 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 NOVA1P51513 510 aaKnown RBP24.06■■□□□ 1.44
VEGFA-209ENST00000425836 CTBP1Q13363 440 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 CUL1Q13616 776 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 RNF187Q5TA31 235 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-209ENST00000425836 FAM83HQ6ZRV2 1179 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-209ENST00000425836 PALM2Q8IXS6 379 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 ARL10Q8N8L6 244 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 GPR156Q8NFN8 814 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 LPGAT1Q92604 370 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 C9orf72Q96LT7 481 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 CCM2Q9BSQ5 444 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 FAM167BQ9BTA0 163 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 PRDM8Q9NQV8 689 aa24.06■■□□□ 1.44
VEGFA-209ENST00000425836 MTRF1LQ9UGC7 380 aaKnown RBP24.06■■□□□ 1.44
VEGFA-209ENST00000425836 A6NCN8 305 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 QSOX1O00391 747 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 PFDN6O15212 129 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 TNFSF14O43557 240 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 SNX2O60749 519 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 KCNK5O95279 499 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 F7P08709 466 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-209ENST00000425836 OR56A5P0C7T3 313 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 CKMT2P17540 419 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 SLC1A2P43004 574 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 NFE2L1Q14494 772 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 PUM1Q14671 1186 aaKnown RBP eCLIP24.05■■□□□ 1.441e-7■■■□□ 15.4
VEGFA-209ENST00000425836 ZNF789Q5FWF6 425 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 XKR5Q6UX68 686 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 GLRX5Q86SX6 157 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 NAGSQ8N159 534 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 KYQ8NBH2 561 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 GSDMBQ8TAX9 411 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 GLMNQ92990 594 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 INTS10Q9NVR2 710 aaKnown RBP24.05■■□□□ 1.44
VEGFA-209ENST00000425836 MOCS1Q9NZB8 636 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 FBXO5Q9UKT4 447 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 CEP250Q9BV73 2442 aa24.05■■□□□ 1.44
VEGFA-209ENST00000425836 C17orf113A0A1B0GUU1 675 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 UBA6A0AVT1 1052 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-209ENST00000425836 KLHL33A6NCF5 533 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 SLU7O95391 586 aaKnown RBP24.04■■□□□ 1.44
VEGFA-209ENST00000425836 CKMT1AP12532 417 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 RPS3P23396 243 aaKnown RBP eCLIP24.04■■□□□ 1.441e-7■■□□□ 12.2
VEGFA-209ENST00000425836 SSTR1P30872 391 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 DNAJC3Q13217 504 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 NR0B2Q15466 257 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 ZNF658BQ4V348 819 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-209ENST00000425836 CAPN12Q6ZSI9 719 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 LRRC6Q86X45 466 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 C17orf82Q86X59 251 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-209ENST00000425836 CNTN4Q8IWV2 1026 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 PATE1Q8WXA2 126 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 VPS37BQ9H9H4 285 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 PPANQ9NQ55 473 aaKnown RBP24.04■■□□□ 1.44
VEGFA-209ENST00000425836 NCKIPSDQ9NZQ3 722 aa24.04■■□□□ 1.44
VEGFA-209ENST00000425836 SPAARA0A1B0GVQ0 90 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 IDSP22304 550 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 GPX6P59796 221 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 TEDDM1Q5T9Z0 273 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 METRNLQ641Q3 311 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 CFAP206Q8IYR0 622 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 C2CD4AQ8NCU7 369 aaPredicted RBP24.03■■□□□ 1.44
VEGFA-209ENST00000425836 BIRC8Q96P09 236 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 FMO2Q99518 471 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 FBXO6Q9NRD1 293 aaPredicted RBP24.03■■□□□ 1.44
VEGFA-209ENST00000425836 FAM8A1Q9UBU6 413 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 PADI4Q9UM07 663 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 NFU1Q9UMS0 254 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 VPS9D1Q9Y2B5 631 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 CRYL1Q9Y2S2 319 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 IQCF5A8MTL0 148 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 FTH1P02794 183 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 GSTM1P09488 218 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 RPL10P27635 214 aaKnown RBP24.03■■□□□ 1.44
VEGFA-209ENST00000425836 FMO4P31512 558 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 ID4P47928 161 aa24.03■■□□□ 1.44
VEGFA-209ENST00000425836 RPIAP49247 311 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms