RNA–Protein interactions for RNA: ENST00000425695.5

HTATSF1-202, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 3

Gene HTATSF1, Length 885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-202ENST00000425695 CLCA4Q14CN2 919 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 TPSAB1Q15661 275 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 PHF19Q5T6S3 580 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 OR6P1Q8NGX9 317 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 SH3KBP1Q96B97 665 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 AHCYL2Q96HN2 611 aaKnown RBP24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 STRADBQ9C0K7 418 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 ZMYND15Q9H091 742 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 BFARQ9NZS9 450 aa24.55■■□□□ 1.52
HTATSF1-202ENST00000425695 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 CCDC187A0A096LP49 1063 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 MGAT4DA6NG13 374 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 SRRM3A6NNA2 597 aaPredicted RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 TMX2-CTNND1H3BSU7 103 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 GOT2P00505 430 aaKnown RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 HOXB3P14651 431 aaPredicted RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 MPSTP25325 297 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 MGAT1P26572 445 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 NPY2RP49146 381 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 UBE2IP63279 158 aaKnown RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 DMPKQ09013 629 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 DBN1Q16643 649 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 BCL7AQ4VC05 210 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 PCID2Q5JVF3 399 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 AGAP9Q5VTM2 703 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 ANKRD22Q5VYY1 191 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 PAPD7Q5XG87 772 aaKnown RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 WASH2PQ6VEQ5 465 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 ZNF574Q6ZN55 896 aaPredicted RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 WDR36Q8NI36 951 aaKnown RBP24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 HEXDCQ8WVB3 486 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 TBC1D10AQ9BXI6 508 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 WASH6PQ9NQA3 447 aa24.54■■□□□ 1.52
HTATSF1-202ENST00000425695 URB1O60287 2271 aaKnown RBP24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 POLBP06746 335 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 CCKBRP32239 447 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 FOXN2P32314 431 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 HALP42357 657 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 CDK16Q00536 496 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 CFHR1Q03591 330 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 ZFP36L1Q07352 338 aaKnown RBP24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 KCNJ11Q14654 390 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 LRRC8BQ6P9F7 803 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 ZNF534Q76KX8 674 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 NLRP9Q7RTR0 991 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 SLITRK4Q8IW52 837 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 CFAP206Q8IYR0 622 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 CLDN19Q8N6F1 224 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 OR2L2Q8NH16 312 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 OR10G6Q8NH81 332 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 CXorf40BQ96DE9 158 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 DDX47Q9H0S4 455 aaKnown RBP24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 RIMKLBQ9ULI2 386 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 NEU2Q9Y3R4 380 aa24.53■■□□□ 1.52
HTATSF1-202ENST00000425695 IGLV3-16A0A075B6K0 115 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 CTAGE9A4FU28 777 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 AP3B1O00203 1094 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 AVILO75366 819 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 HGFP14210 728 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 CSF2RBP32927 897 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 FNTAP49354 379 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 PRAMEP78395 509 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 METRNLQ641Q3 311 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 AFTPHQ6ULP2 937 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 RAB11FIP2Q7L804 512 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 FBXO39Q8N4B4 442 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 LILRA3Q8N6C8 439 aaPredicted RBP24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 AVL9Q8NBF6 648 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 OR4L1Q8NH43 312 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 GRK7Q8WTQ7 553 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 CPT1BQ92523 772 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 LIN37Q96GY3 246 aaPredicted RBP24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 IL22Q9GZX6 179 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 SYBUQ9NX95 663 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 TMEM9Q9P0T7 183 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 SAR1BQ9Y6B6 198 aa24.52■■□□□ 1.52
HTATSF1-202ENST00000425695 ANKRD11Q6UB99 2663 aaPredicted RBP24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 TLX3O43711 291 aaPredicted RBP24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 RBMS1P29558 406 aaKnown RBP24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 PRLHRP49683 370 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 GPLD1P80108 840 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 SARNPP82979 210 aaKnown RBP24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 ACVR1Q04771 509 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 PPP1R7Q15435 360 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 RPE65Q16518 533 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 CES3Q6UWW8 571 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 TMEM26Q6ZUK4 368 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 CREG2Q8IUH2 290 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 LSMEM2Q8N112 164 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 NCSTNQ92542 709 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 PRR11Q96HE9 360 aaPredicted RBP24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 WWP1Q9H0M0 922 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 CFAP20Q9Y6A4 193 aaKnown RBP24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 PRSS21Q9Y6M0 314 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 WDFY3Q8IZQ1 3526 aa24.51■■□□□ 1.51
HTATSF1-202ENST00000425695 IGHV5-10-1A0A0J9YXX1 117 aa24.5■■□□□ 1.51
HTATSF1-202ENST00000425695 GOLGA8MH3BSY2 632 aa24.5■■□□□ 1.51
HTATSF1-202ENST00000425695 DUX1O43812 170 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms