RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 VPS35Q96QK1 796 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 CMKLR1Q99788 373 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 APOL2Q9BQE5 337 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 NUDT22Q9BRQ3 303 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 ZCCHC2Q9C0B9 1178 aaKnown RBP12.53□□□□□ -0.4
SGCE-203ENST00000425444 KLC4Q9NSK0 619 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 TBC1D29Q9UFV1 150 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 DNAJC16Q9Y2G8 782 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 TACC2O95359 2948 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 NAV3Q8IVL0 2385 aa12.52□□□□□ -0.4
SGCE-203ENST00000425444 PDZK1P1A8MUH7 402 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 KMOO15229 486 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
SGCE-203ENST00000425444 KRT86O43790 486 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 DUX1O43812 170 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 F3P13726 295 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 COL8A1P27658 744 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 FASLGP48023 281 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 GPLD1P80108 840 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 ZFP36L1Q07352 338 aaKnown RBP12.52□□□□□ -0.41
SGCE-203ENST00000425444 OLIG2Q13516 323 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 ITGA9Q13797 1035 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 SEPT7Q16181 437 aaKnown RBP12.52□□□□□ -0.41
SGCE-203ENST00000425444 CLPPQ16740 277 aaPredicted RBP12.52□□□□□ -0.41
SGCE-203ENST00000425444 SEL1L2Q5TEA6 688 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 TMEM164Q5U3C3 297 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 NKAIN2Q5VXU1 208 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 TMPRSS9Q7Z410 1059 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 SLC9B2Q86UD5 537 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 SLITRK4Q8IW52 837 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 CATSPER2Q96P56 530 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 GORASP1Q9BQQ3 440 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 SEMA6CQ9H3T2 930 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 IL26Q9NPH9 171 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.52□□□□□ -0.41
SGCE-203ENST00000425444 IL17CQ9P0M4 197 aa12.52□□□□□ -0.41
SGCE-203ENST00000425444 ARHGEF17Q96PE2 2063 aaPredicted RBP12.52□□□□□ -0.41
SGCE-203ENST00000425444 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 IGHV1OR21-1A0A087WYE8 117 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 KIR2DS5A0A0G2JLQ3 304 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 A0A0G2JNG1 304 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 OR5K4A6NMS3 321 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 C2orf81A6NN90 581 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 STMND1H3BQB6 276 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 KIR2DS3K7RE56 304 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 GPR39O43194 453 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 VPS4BO75351 444 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 VCLP18206 1134 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 CD1CP29017 333 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 AKT1P31749 480 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 MAPK9P45984 424 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 KLRB1Q12918 225 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 KIR2DS5Q14953 304 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 CHRNA6Q15825 494 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 KHDC1Q4VXA5 237 aaKnown RBP12.51□□□□□ -0.41
SGCE-203ENST00000425444 LACTB2Q53H82 288 aaPredicted RBP12.51□□□□□ -0.41
SGCE-203ENST00000425444 IYDQ6PHW0 289 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 TRIM48Q8IWZ4 208 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 SRRM1Q8IYB3 904 aaKnown RBP12.51□□□□□ -0.41
SGCE-203ENST00000425444 RNF10Q8N5U6 811 aaKnown RBP12.51□□□□□ -0.41
SGCE-203ENST00000425444 IL22RA1Q8N6P7 574 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 RCBTB1Q8NDN9 531 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 CCDC112Q8NEF3 446 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 OR10G6Q8NH81 332 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 BRSK1Q8TDC3 778 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 SH3KBP1Q96B97 665 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 ABHD17AQ96GS6 310 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 HES6Q96HZ4 224 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 CCDC74BQ96LY2 380 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 TBL1YQ9BQ87 522 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 TIMM29Q9BSF4 260 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 SARS2Q9NP81 518 aaKnown RBP12.51□□□□□ -0.41
SGCE-203ENST00000425444 PRDM8Q9NQV8 689 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 VPS4AQ9UN37 437 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 ARL5AQ9Y689 179 aa12.51□□□□□ -0.41
SGCE-203ENST00000425444 IGHV5-10-1A0A0J9YXX1 117 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 A6NCN8 305 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 PRR19A6NJB7 356 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 CHUKO15111 745 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A9O60656 530 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 PRAMEF1O95521 474 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 CRTAMO95727 393 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 RNF224P0DH78 156 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 LIFP15018 202 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 ZNF7P17097 686 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A6P19224 532 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 LPOP22079 712 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A1P22309 533 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A4P22310 534 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 GNLYP22749 145 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 MPSTP25325 297 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 CSF2RBP32927 897 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A3P35503 534 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 DCTP40126 519 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 CLCNKAP51800 687 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms