RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 LRRTM4Q86VH4 590 aa15.9■□□□□ 0.14
DDR1-234ENST00000424544 JPH3Q8WXH2 748 aaPredicted RBP15.9■□□□□ 0.14
DDR1-234ENST00000424544 ZPBPQ9BS86 351 aa15.9■□□□□ 0.14
DDR1-234ENST00000424544 STN1Q9H668 368 aaKnown RBP15.9■□□□□ 0.14
DDR1-234ENST00000424544 BPIFA1Q9NP55 256 aa15.9■□□□□ 0.14
DDR1-234ENST00000424544 SIDT1Q9NXL6 827 aaKnown RBP15.9■□□□□ 0.14
DDR1-234ENST00000424544 A8MU76 341 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 GAPDHSO14556 408 aaPredicted RBP15.89■□□□□ 0.13
DDR1-234ENST00000424544 TOX3O15405 576 aaPredicted RBP15.89■□□□□ 0.13
DDR1-234ENST00000424544 RAD1O60671 282 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 KCNJ13O60928 360 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 MTX2O75431 263 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 ZIC2O95409 532 aaPredicted RBP15.89■□□□□ 0.13
DDR1-234ENST00000424544 LIFP15018 202 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 ATP1A2P50993 1020 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 MSLNQ13421 630 aaPredicted RBP15.89■□□□□ 0.13
DDR1-234ENST00000424544 XRCC4Q13426 336 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 CLCA4Q14CN2 919 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 SIX1Q15475 284 aaPredicted RBP15.89■□□□□ 0.13
DDR1-234ENST00000424544 SLC1A5Q15758 541 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 CCNG2Q16589 344 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 ZDHHC20Q5W0Z9 365 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 ZC3H18Q86VM9 953 aaKnown RBP15.89■□□□□ 0.13
DDR1-234ENST00000424544 FAM129CQ86XR2 697 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 PLXDC1Q8IUK5 500 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 CACNA2D3Q8IZS8 1091 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 ZSCAN1Q8NBB4 408 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 ACTL9Q8TC94 416 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 BRSK1Q8TDC3 778 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
DDR1-234ENST00000424544 APMAPQ9HDC9 416 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 SLC40A1Q9NP59 571 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 HOMER3Q9NSC5 361 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 SMARCAL1Q9NZC9 954 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDR1-234ENST00000424544 MRFAP1Q9Y605 127 aa15.89■□□□□ 0.13
DDR1-234ENST00000424544 HACD1B0YJ81 288 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 CAPN5O15484 640 aaPredicted RBP15.88■□□□□ 0.13
DDR1-234ENST00000424544 MAP4P27816 1152 aaKnown RBP15.88■□□□□ 0.13
DDR1-234ENST00000424544 CHRNA4P43681 627 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 OTUD4Q01804 1114 aaKnown RBP15.88■□□□□ 0.13
DDR1-234ENST00000424544 CKAP4Q07065 602 aaKnown RBP15.88■□□□□ 0.13
DDR1-234ENST00000424544 DMPKQ09013 629 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 SNAP47Q5SQN1 464 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 CEACAM20Q6UY09 585 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 RANBP10Q6VN20 620 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 PID1Q7Z2X4 250 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 IL22RA1Q8N6P7 574 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 HAUS1Q96CS2 278 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 SLC45A3Q96JT2 553 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 C9orf72Q96LT7 481 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 QKIQ96PU8 341 aaKnown RBP eCLIP15.88■□□□□ 0.13
DDR1-234ENST00000424544 CTRCQ99895 268 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 GORASP1Q9BQQ3 440 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 AP1M1Q9BXS5 423 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 RAB33BQ9H082 229 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 WDR70Q9NW82 654 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 GEMIN8Q9NWZ8 242 aaKnown RBP15.88■□□□□ 0.13
DDR1-234ENST00000424544 HACD3Q9P035 362 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 SEMA5BQ9P283 1151 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 EPHA6Q9UF33 1036 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 TRHDEQ9UKU6 1024 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 WDR37Q9Y2I8 494 aa15.88■□□□□ 0.13
DDR1-234ENST00000424544 DNMT3AQ9Y6K1 912 aaPredicted RBP15.88■□□□□ 0.13
DDR1-234ENST00000424544 GOLGA6L10A0A0M3HER8 536 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UGT1A9O60656 530 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UBXN7O94888 489 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 DLGAP3O95886 979 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 VIPP01282 170 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 SFTPCP11686 197 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UGT1A6P19224 532 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 HLA-DPA1P20036 260 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 IDSP22304 550 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UGT1A1P22309 533 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UGT1A4P22310 534 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 RPL10P27635 214 aaKnown RBP15.87■□□□□ 0.13
DDR1-234ENST00000424544 ADRA1AP35348 466 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 GFERP55789 205 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 MPP3Q13368 585 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 CHRNA6Q15825 494 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 INSCQ1MX18 579 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 CRTC3Q6UUV7 619 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 RBM12BQ8IXT5 1001 aaKnown RBP15.87■□□□□ 0.13
DDR1-234ENST00000424544 SLC25A41Q8N5S1 370 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 PRELID2Q8N945 189 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 C1orf54Q8WWF1 131 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 OSGEPL1Q9H4B0 414 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UGT1A7Q9HAW7 530 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UGT1A10Q9HAW8 530 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 UGT1A8Q9HAW9 530 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 POT1Q9NUX5 634 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 KLHL8Q9P2G9 620 aaPredicted RBP15.87■□□□□ 0.13
DDR1-234ENST00000424544 DNAJC16Q9Y2G8 782 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 R3HDM2Q9Y2K5 976 aaKnown RBP15.87■□□□□ 0.13
DDR1-234ENST00000424544 MYO18BQ8IUG5 2567 aa15.87■□□□□ 0.13
DDR1-234ENST00000424544 LOC101059948A0A1B0GTJ6 334 aa15.86■□□□□ 0.13
DDR1-234ENST00000424544 H7C0C1 242 aa15.86■□□□□ 0.13
DDR1-234ENST00000424544 POLR1CO15160 346 aaPredicted RBP15.86■□□□□ 0.13
DDR1-234ENST00000424544 PPFIA2O75334 1257 aa15.86■□□□□ 0.13
DDR1-234ENST00000424544 FAM87AP0C7U9 286 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms