RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KRT14P02533 472 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CAPNS1P04632 268 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 JMJD7P0C870 316 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 TCP1P17987 556 aaKnown RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 ACRV1P26436 265 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CD1CP29017 333 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 PBLDP30039 288 aaPredicted RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 MAPK9P45984 424 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 EPHA4P54764 986 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 DRG2P55039 364 aaKnown RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 SESN2P58004 480 aaPredicted RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 ERVPABLB-1P60509 514 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 GNG11P61952 73 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CDK16Q00536 496 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 DMPKQ09013 629 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CCDC173Q0VFZ6 552 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 TRIP13Q15645 432 aaPredicted RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 TBC1D25Q3MII6 688 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 BCL7AQ4VC05 210 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 NKAIN2Q5VXU1 208 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 ZNF449Q6P9G9 518 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CCDC137Q6PK04 289 aaKnown RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 AFTPHQ6ULP2 937 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 ABRAXAS1Q6UWZ7 409 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 LRRC69Q6ZNQ3 347 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 C11orf96Q7Z7L8 435 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 B3GNT8Q7Z7M8 397 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 SERPINA9Q86WD7 417 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 ZNF761Q86XN6 746 aaPredicted RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 RBM12BQ8IXT5 1001 aaKnown RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 ACTRT1Q8TDG2 376 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 GRK7Q8WTQ7 553 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 COG1Q8WTW3 980 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 FGF11Q92914 225 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 MS4A14Q96JA4 679 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 IL22Q9GZX6 179 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 EPB41L1Q9H4G0 881 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 POT1Q9NUX5 634 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 ZDHHC3Q9NYG2 299 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 RIMKLBQ9ULI2 386 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 SNX12Q9UMY4 172 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 PLXNB3Q9ULL4 1909 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 LILRA5A6NI73 299 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 F8W8V4 182 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TAF4O00268 1085 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 QSOX1O00391 747 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 PHF2O75151 1096 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TNFSF15O95150 251 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 ATP1B2P14415 290 aaPredicted RBP10.74□□□□□ -0.69
USP49-204ENST00000423567 TPSB2P20231 275 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 CA5AP35218 305 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 PPARGP37231 505 aaPredicted RBP10.74□□□□□ -0.69
USP49-204ENST00000423567 COILP38432 576 aaPredicted RBP10.74□□□□□ -0.69
USP49-204ENST00000423567 GRIA1P42261 906 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 NPY2RP49146 381 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 PRLHRP49683 370 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 VPS41P49754 854 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 PCBP4P57723 403 aaKnown RBP10.74□□□□□ -0.69
USP49-204ENST00000423567 UBE2IP63279 158 aaKnown RBP10.74□□□□□ -0.69
USP49-204ENST00000423567 PRAMEP78395 509 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 ZFP36L1Q07352 338 aaKnown RBP10.74□□□□□ -0.69
USP49-204ENST00000423567 GPS1Q13098 491 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 SQSTM1Q13501 440 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TRA2AQ13595 282 aaKnown RBP eCLIP10.74□□□□□ -0.69
USP49-204ENST00000423567 NFE2L1Q14494 772 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TPSAB1Q15661 275 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 PCID2Q5JVF3 399 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TSTD2Q5T7W7 516 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 LYPLAL1Q5VWZ2 237 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TMEM71Q6P5X7 295 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 IGF2-ASQ6U949 168 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TMEM26Q6ZUK4 368 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 SLITRK4Q8IW52 837 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 OR4D9Q8NGE8 314 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 OR6P1Q8NGX9 317 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 OR2L2Q8NH16 312 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 PEX13Q92968 403 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 NUDT22Q9BRQ3 303 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 UCK1Q9HA47 277 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 SMARCAL1Q9NZC9 954 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 SCHIP1Q9P0W5 487 aaPredicted RBP10.74□□□□□ -0.69
USP49-204ENST00000423567 FAM8A1Q9UBU6 413 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 ANAPC5Q9UJX4 755 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 ACSL5Q9ULC5 683 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 TCAF1Q9Y4C2 921 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 LOXL2Q9Y4K0 774 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 IGF2RP11717 2491 aa10.74□□□□□ -0.69
USP49-204ENST00000423567 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 TRBV5-4A0A0C4DH59 114 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 IGHV5-10-1A0A0J9YXX1 117 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 PRR19A6NJB7 356 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 OR52A4PA6NMU1 304 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 USP27XA6NNY8 438 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 HGSO14964 777 aaPredicted RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 AP2A2O94973 939 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 ITGA2BP08514 1039 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 GSTM1P09488 218 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms