RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 FBXO39Q8N4B4 442 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 NOL6Q9H6R4 1146 aaKnown RBP16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 INTS6Q9UL03 887 aaKnown RBP16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 PIN4Q9Y237 131 aaKnown RBP16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 FAM234BA2RU67 622 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 SYCE1LA8MT33 242 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 GNGT2O14610 69 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 VPS4BO75351 444 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 PAGE1O75459 146 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 SERPINB1P30740 379 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 DSC2Q02487 901 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ARTNQ5T4W7 220 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ZNF691Q5VV52 312 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 LAIR1Q6GTX8 287 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ZFAND4Q86XD8 727 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ARMC8Q8IUR7 673 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 RORBQ92753 470 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ZNF583Q96ND8 569 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ZNF599Q96NL3 588 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 TMEM209Q96SK2 561 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 MIR1-1HGQ9H1L0 117 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ATP13A1Q9HD20 1204 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 THG1LQ9NWX6 298 aaKnown RBP16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 COMMD8Q9NX08 183 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 SMPD4Q9NXE4 827 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 LIMD1Q9UGP4 676 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ASB1Q9Y576 335 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 MROH6A6NGR9 719 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 GABRDO14764 452 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 MITFO75030 526 aaPredicted RBP16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ECI2O75521 394 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 SEC24AO95486 1093 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 SLC2A3P11169 496 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 BMPR1AP36894 532 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 SEPHS1P49903 392 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 CDK5R2Q13319 367 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 RAPSNQ13702 412 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 TSNQ15631 228 aaKnown RBP16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 C6orf136Q5SQH8 315 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 CYP2U1Q7Z449 544 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 P2RY8Q86VZ1 359 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 CDK15Q96Q40 435 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ZNF300Q96RE9 604 aaPredicted RBP16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 ARNT2Q9HBZ2 717 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 DNAJB9Q9UBS3 223 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 RNF112Q9ULX5 631 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
NPC1L1-203ENST00000423141 PRMT5O14744 637 aaPredicted RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 GPR32O75388 356 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 PFKLP17858 780 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 MAGP20916 626 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ZNF135P52742 658 aaPredicted RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ERVK-8P63133 956 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 IL5RAQ01344 420 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 TMEM40Q8WWA1 233 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 YIPF6Q96EC8 236 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 OTUD5Q96G74 571 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ZFP42Q96MM3 310 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 RDH12Q96NR8 316 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 NDEL1Q9GZM8 345 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 SLIRPQ9GZT3 109 aaKnown RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 GALPQ9UBC7 116 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 NUDT5Q9UKK9 219 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 PCDHGA10Q9Y5H3 936 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ARL5AQ9Y689 179 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 CDC7O00311 574 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 TNPO2O14787 897 aaKnown RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 LDB2O43679 373 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 DFNA5O60443 496 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 KCNK2O95069 426 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 MOCS2O96007 188 aaPredicted RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 FTH1P02794 183 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 SPNP16150 400 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ACVR2AP27037 513 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 PSMB9P28065 219 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 MASP1P48740 699 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ALDH7A1P49419 539 aaKnown RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 SLC10A7Q0GE19 358 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 PRKG2Q13237 762 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 LRIT3Q3SXY7 679 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ATP6AP1LQ52LC2 224 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 SIRPB2Q5JXA9 342 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 VARS2Q5ST30 1063 aaKnown RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ANKS6Q68DC2 871 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 GALNT5Q7Z7M9 940 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 GALNT7Q86SF2 657 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 AKAP14Q86UN6 197 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 OR10Q1Q8NGQ4 319 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 RHEBL1Q8TAI7 183 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 SLC47A1Q96FL8 570 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 FCRL2Q96LA5 508 aaPredicted RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 DACH2Q96NX9 599 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 RBM4BQ9BQ04 359 aaKnown RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 C17orf80Q9BSJ5 609 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 RBM4Q9BWF3 364 aaKnown RBP16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 HOXD1Q9GZZ0 328 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 SLC25A51Q9H1U9 297 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 DSN1Q9H410 356 aa16.46■□□□□ 0.23
NPC1L1-203ENST00000423141 ACTL8Q9H568 366 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms