RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TPP1O14773 563 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 KMOO15229 486 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 FLRT2O43155 660 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 SIGLEC6O43699 453 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 SNX2O60749 519 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 NDUFS3O75489 264 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 SLU7O95391 586 aaKnown RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 MYF5P13349 255 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 ZNF7P17097 686 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 PBLDP30039 288 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 ECHS1P30084 290 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 PPARGP37231 505 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 ACTR1BP42025 376 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 NSG1P42857 185 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 GRK6P43250 576 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 MAGEA4P43358 317 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 TTPAP49638 278 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 ACTR1AP61163 376 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 CTBP1Q13363 440 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 LRP8Q14114 963 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 INSCQ1MX18 579 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 INAVAQ3KP66 663 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 BCL7AQ4VC05 210 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 AARS2Q5JTZ9 985 aaKnown RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 STEAP4Q687X5 459 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 ZNF470Q6ECI4 717 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 TRMT10BQ6PF06 316 aaKnown RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 CAPN12Q6ZSI9 719 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 C11orf96Q7Z7L8 435 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 PIP4P1Q86T03 277 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 KCNMB4Q86W47 210 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 CILP2Q8IUL8 1156 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 DENND6AQ8IWF6 608 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 SFTPA2Q8IWL1 248 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 PALM2Q8IXS6 379 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 SDR16C5Q8N3Y7 309 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 GPR150Q8NGU9 434 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 OR4C6Q8NH72 309 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 SCG3Q8WXD2 468 aaKnown RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 ZNF514Q96K75 400 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 C9orf72Q96LT7 481 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 FOXP3Q9BZS1 431 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 DPEP2Q9H4A9 486 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 IARS2Q9NSE4 1012 aaKnown RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 KLC4Q9NSK0 619 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 NLGN3Q9NZ94 848 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 TAAR2Q9P1P5 351 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 SIRPGQ9P1W8 387 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 GULP1Q9UBP9 304 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 MTRF1LQ9UGC7 380 aaKnown RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 PCOLCE2Q9UKZ9 415 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 NFU1Q9UMS0 254 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 GPR34Q9UPC5 381 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 WASF3Q9UPY6 502 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 DNAJC16Q9Y2G8 782 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 DNMT3AQ9Y6K1 912 aaPredicted RBP9.13□□□□□ -0.95
PDGFC-202ENST00000422544 ADAMTS20P59510 1910 aa9.13□□□□□ -0.95
PDGFC-202ENST00000422544 TRBV23OR9-2A0A075B6M9 112 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 IQCF5A8MTL0 148 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 CBFA2T3O75081 653 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 AP2A2O94973 939 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 LDOC1O95751 146 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-202ENST00000422544 EML2O95834 649 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 S1PR4O95977 384 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 ALPPL2P10696 532 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 ITGB6P18564 788 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 SSTR1P30872 391 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FMO4P31512 558 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 SLC1A2P43004 574 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 MPP1Q00013 466 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 CUL1Q13616 776 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 TYSND1Q2T9J0 566 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 ZNF789Q5FWF6 425 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 C6orf132Q5T0Z8 1188 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 N4BP2L1Q5TBK1 243 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-202ENST00000422544 LVRNQ6Q4G3 990 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FAM83HQ6ZRV2 1179 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-202ENST00000422544 C3orf62Q6ZUJ4 267 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 AMZ2Q86W34 360 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 DEFB124Q8NES8 71 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 CALML6Q8TD86 181 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 CERS2Q96G23 380 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 TCF12Q99081 682 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FMO2Q99518 471 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 TIMM29Q9BSF4 260 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FAM167BQ9BTA0 163 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 DUSP23Q9BVJ7 150 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FAM129AQ9BZQ8 928 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 OSGEPL1Q9H4B0 414 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 PRDM8Q9NQV8 689 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FBXO6Q9NRD1 293 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-202ENST00000422544 MOCS1Q9NZB8 636 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 SLC17A6Q9P2U8 582 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FAM8A1Q9UBU6 413 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 TBC1D29Q9UFV1 150 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 FBXO5Q9UKT4 447 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 CRYL1Q9Y2S2 319 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 SCN8AQ9UQD0 1980 aa9.12□□□□□ -0.95
PDGFC-202ENST00000422544 MYLKQ15746 1914 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms