RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TAF1AQ15573 450 aaPredicted RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 LONRF2Q1L5Z9 754 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 LINC00303Q3SY05 128 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 AGAP9Q5VTM2 703 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 CACHD1Q5VU97 1274 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 IRGCQ6NXR0 463 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 CEACAM20Q6UY09 585 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 RANBP10Q6VN20 620 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 FAM83HQ6ZRV2 1179 aaPredicted RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 FAM92BQ6ZTR7 304 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 C11orf96Q7Z7L8 435 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 SYCE1Q8N0S2 351 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 TXLNBQ8N3L3 684 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 TAB3Q8N5C8 712 aaPredicted RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 EXD3Q8N9H8 876 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 ALG3Q92685 438 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 RTP4Q96DX8 246 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 MED8Q96G25 268 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 DCUN1D1Q96GG9 259 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 C9orf72Q96LT7 481 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 SPATA13Q96N96 652 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 GORASP1Q9BQQ3 440 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 UCK1Q9HA47 277 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 SLC40A1Q9NP59 571 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 FBXO8Q9NRD0 319 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 POT1Q9NUX5 634 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 OGFRQ9NZT2 677 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 FKBPLQ9UIM3 349 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 WDR37Q9Y2I8 494 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 PCDHGA4Q9Y5G9 962 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 LAMA5O15230 3695 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 A0A0U1RQJ8 604 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 CCL22O00626 93 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 SRP72O76094 671 aaKnown RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 ZIC2O95409 532 aaPredicted RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 PRAMEF1O95521 474 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 POLBP06746 335 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 LIFP15018 202 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 ADRA1AP35348 466 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 GPR18Q14330 331 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 KRT33BQ14525 404 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 PLCL1Q15111 1095 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 RPE65Q16518 533 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 TBR1Q16650 682 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 PARP6Q2NL67 630 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 WASH2PQ6VEQ5 465 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 ARHGEF18Q6ZSZ5 1173 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 TAS2R42Q7RTR8 314 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 RBM12BQ8IXT5 1001 aaKnown RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 CFAP206Q8IYR0 622 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 UNC5BQ8IZJ1 945 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 BMPERQ8N8U9 685 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 LRRC57Q8N9N7 239 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 FAM71DQ8N9W8 422 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 TTC13Q8NBP0 860 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 DDHD1Q8NEL9 900 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 OR13C4Q8NGS5 318 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 KIAA1143Q96AT1 154 aaPredicted RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 ZDHHC12Q96GR4 267 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 ZNF514Q96K75 400 aaPredicted RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 PPP1R2P1Q96PQ5 205 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 ALS2CR12Q96Q35 445 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 TEFMQ96QE5 360 aaKnown RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 TBL1YQ9BQ87 522 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 ZPBPQ9BS86 351 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 WWP1Q9H0M0 922 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 WASH6PQ9NQA3 447 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 IMP3Q9NV31 184 aaKnown RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 CRLS1Q9UJA2 301 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 CFAP20Q9Y6A4 193 aaKnown RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 SHROOM3Q8TF72 1996 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 LRP4O75096 1905 aa9.11□□□□□ -0.95
NUP50-206ENST00000422489 COL27A1Q8IZC6 1860 aaPredicted RBP9.11□□□□□ -0.95
NUP50-206ENST00000422489 LOC101059948A0A1B0GTJ6 334 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 MGAT4DA6NG13 374 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 PRR19A6NJB7 356 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 MIF4GDA9UHW6 222 aaKnown RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 B8ZZF3 427 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 GAPDHSO14556 408 aaPredicted RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 DDX3YO15523 660 aaKnown RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 STK17BO94768 372 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 METTL18O95568 372 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 C9P02748 559 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 FAM87AP0C7U9 286 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 RALBP11234 206 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 ARL4DP49703 201 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 SH3BP2P78314 561 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 PDE1BQ01064 536 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 NFATC3Q12968 1075 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 SEPT6Q14141 434 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 ZRANB3Q5FWF4 1079 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 DENND5AQ6IQ26 1287 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 TIPARPQ7Z3E1 657 aaKnown RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 RASGRP3Q8IV61 690 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 NLGN4XQ8N0W4 816 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms