RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CREB5Q02930 508 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 HEPACAMQ14CZ8 416 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 HIC2Q96JB3 615 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 OR52E6Q96RD3 313 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 GPR174Q9BXC1 333 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ANKHQ9HCJ1 492 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 LEF1Q9UJU2 399 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 RAP2CQ9Y3L5 183 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 IGKV6-21A0A0C4DH24 114 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 TRBC1P01850 177 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 CDH5P33151 784 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 GABRB2P47870 512 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 MRPS22P82650 360 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 RNASEH2BQ5TBB1 312 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 LRRC66Q68CR7 880 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 C16orf87Q6PH81 154 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ERN2Q76MJ5 926 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 FEM1AQ9BSK4 669 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 COG5Q9UP83 839 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 RCCD1A6NED2 376 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 CBSLP0DN79 551 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 CBSP35520 551 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 RTP2Q5QGT7 225 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 FAM20CQ8IXL6 584 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 MRPL43Q8N983 215 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ZCCHC10Q8TBK6 192 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 TMEM40Q8WWA1 233 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ATXN2LQ8WWM7 1075 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 POP5Q969H6 163 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 TWNKQ96RR1 684 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 KCNN2Q9H2S1 579 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 SNRPB2P08579 225 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 TSPAN8P19075 237 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 CLCNKAP51800 687 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 PLEKHG6Q3KR16 790 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 GPR180Q86V85 440 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 NCSTNQ92542 709 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 JSRP1Q96MG2 331 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ACSL5Q9ULC5 683 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 SCN1AP35498 2009 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 A8MU76 341 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 PEX11AO75192 247 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 MAGEA10P43363 369 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 NOVP48745 357 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 SEMG2Q02383 582 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 PDK4Q16654 411 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 CYP2U1Q7Z449 544 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 KLHDC9Q8NEP7 349 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 AENQ8WTP8 325 aaKnown RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 TELO2Q9Y4R8 837 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 SNX13Q9Y5W8 968 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 GSRP00390 522 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 DPP6P42658 865 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 CRELD2Q6UXH1 353 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 PIGKQ92643 395 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 PGM2Q96G03 612 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 SEPHS2Q99611 448 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 LRTM1Q9HBL6 345 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 EQTNQ9NQ60 294 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 MRASO14807 208 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 C5AR1P21730 350 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 CLK1P49759 484 aaKnown RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF132P52740 706 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 TAS2R41P59536 307 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF155Q12901 538 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 SEMA5AQ13591 1074 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 DHFR2Q86XF0 187 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 UTP15Q8TED0 518 aaKnown RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 TBCDQ9BTW9 1192 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 REEP1Q9H902 201 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 ACVRL1P37023 503 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 NRG3P56975 720 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 MTAPQ13126 283 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 CCINQ13939 588 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 DHCR24Q15392 516 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 LYSMD3Q7Z3D4 306 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 TMPRSS6Q8IU80 811 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 C10orf107Q8IVU9 208 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 SAMD14Q8IZD0 417 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 KIF2BQ8N4N8 673 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 TXNDC5Q8NBS9 432 aaKnown RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 PPP1R14AQ96A00 147 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 CASD1Q96PB1 797 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 CAB39LQ9H9S4 337 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 DDX3YO15523 660 aaKnown RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 RANBP1P43487 201 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 IFI35P80217 286 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 SPATA19Q7Z5L4 167 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 CAMKVQ8NCB2 501 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 FBXO15Q8NCQ5 510 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-206ENST00000421141 SPOCK2Q92563 424 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 EPB41L4BQ9H329 900 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 BTRCQ9Y297 605 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 AK5Q9Y6K8 562 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 TAS1R3Q7RTX0 852 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 C19orf60Q96EN9 201 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 PAAF1Q9BRP4 392 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 LRRC4CQ9HCJ2 640 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 ALKBH4Q9NXW9 302 aa10.61□□□□□ -0.71
PTCH1-206ENST00000421141 TRAF6Q9Y4K3 522 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms