RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SH3BP2P78314 561 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 CACHD1Q5VU97 1274 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 C11orf63Q6NUN7 778 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 C6orf15Q6UXA7 325 aaPredicted RBP17.02■□□□□ 0.32
MSH6-203ENST00000420813 BBS12Q6ZW61 710 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 CCDC50Q8IVM0 306 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 APOBEC4Q8WW27 367 aaKnown RBP17.02■□□□□ 0.32
MSH6-203ENST00000420813 ZNF514Q96K75 400 aaPredicted RBP17.02■□□□□ 0.32
MSH6-203ENST00000420813 FSD1LQ9BXM9 530 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 GOLPH3Q9H4A6 298 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 TRIM10Q9UDY6 481 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 RSPH14Q9UHP6 348 aa17.02■□□□□ 0.32
MSH6-203ENST00000420813 PIKFYVEQ9Y2I7 2098 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 PTPN13Q12923 2485 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 KLHL33A6NCF5 533 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 APOC4-APOC2K7ER74 178 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 GAPDHSO14556 408 aaPredicted RBP17.01■□□□□ 0.31
MSH6-203ENST00000420813 KIF1CO43896 1103 aaKnown RBP17.01■□□□□ 0.31
MSH6-203ENST00000420813 UGT1A9O60656 530 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 POP7O75817 140 aaKnown RBP17.01■□□□□ 0.31
MSH6-203ENST00000420813 NDUFA10O95299 355 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 APOC2P02655 101 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 ZNF28P17035 718 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 NELFEP18615 380 aaKnown RBP17.01■□□□□ 0.31
MSH6-203ENST00000420813 UGT1A6P19224 532 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 UGT1A1P22309 533 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 UGT1A4P22310 534 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 MARCKSL1P49006 195 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 CTSCP53634 463 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
MSH6-203ENST00000420813 GPRC6AQ5T6X5 926 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 IRGCQ6NXR0 463 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 KLHL35Q6PF15 583 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 RASGRP3Q8IV61 690 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 TC2NQ8N9U0 490 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 UBXN4Q92575 508 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 HAUS1Q96CS2 278 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 GBA3Q9H227 469 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 UGT1A7Q9HAW7 530 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 UGT1A10Q9HAW8 530 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 UGT1A8Q9HAW9 530 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 LUC7LQ9NQ29 371 aaKnown RBP17.01■□□□□ 0.31
MSH6-203ENST00000420813 NBASA2RRP1 2371 aa17.01■□□□□ 0.31
MSH6-203ENST00000420813 F5H423 210 aaPredicted RBP17■□□□□ 0.31
MSH6-203ENST00000420813 STX7O15400 261 aaKnown RBP17■□□□□ 0.31
MSH6-203ENST00000420813 GPR39O43194 453 aa17■□□□□ 0.31
MSH6-203ENST00000420813 ANXA9O76027 345 aa17■□□□□ 0.31
MSH6-203ENST00000420813 KIAA0754O94854 1291 aa17■□□□□ 0.31
MSH6-203ENST00000420813 MT-ND3P03897 115 aa17■□□□□ 0.31
MSH6-203ENST00000420813 DLSTP36957 453 aa17■□□□□ 0.31
MSH6-203ENST00000420813 GEMP55040 296 aa17■□□□□ 0.31
MSH6-203ENST00000420813 COPS2P61201 443 aa17■□□□□ 0.31
MSH6-203ENST00000420813 TLE1Q04724 770 aa17■□□□□ 0.31
MSH6-203ENST00000420813 RPE65Q16518 533 aa17■□□□□ 0.31
MSH6-203ENST00000420813 LONRF2Q1L5Z9 754 aa17■□□□□ 0.31
MSH6-203ENST00000420813 METRNLQ641Q3 311 aa17■□□□□ 0.31
MSH6-203ENST00000420813 ITPRIPL1Q6GPH6 555 aa17■□□□□ 0.31
MSH6-203ENST00000420813 TMEM220Q6QAJ8 160 aa17■□□□□ 0.31
MSH6-203ENST00000420813 SARM1Q6SZW1 724 aa17■□□□□ 0.31
MSH6-203ENST00000420813 FAM92BQ6ZTR7 304 aa17■□□□□ 0.31
MSH6-203ENST00000420813 PPP1R3BQ86XI6 285 aa17■□□□□ 0.31
MSH6-203ENST00000420813 CCDC170Q8IYT3 715 aa17■□□□□ 0.31
MSH6-203ENST00000420813 GALNT6Q8NCL4 622 aa17■□□□□ 0.31
MSH6-203ENST00000420813 GPR150Q8NGU9 434 aa17■□□□□ 0.31
MSH6-203ENST00000420813 C9orf43Q8TAL5 461 aaPredicted RBP17■□□□□ 0.31
MSH6-203ENST00000420813 STAMBPL1Q96FJ0 436 aa17■□□□□ 0.31
MSH6-203ENST00000420813 SLC41A2Q96JW4 573 aa17■□□□□ 0.31
MSH6-203ENST00000420813 FCRL4Q96PJ5 515 aa17■□□□□ 0.31
MSH6-203ENST00000420813 CD180Q99467 661 aa17■□□□□ 0.31
MSH6-203ENST00000420813 FERMT1Q9BQL6 677 aa17■□□□□ 0.31
MSH6-203ENST00000420813 ANAPC2Q9UJX6 822 aa17■□□□□ 0.31
MSH6-203ENST00000420813 KCND3Q9UK17 655 aa17■□□□□ 0.31
MSH6-203ENST00000420813 CROTQ9UKG9 612 aa17■□□□□ 0.31
MSH6-203ENST00000420813 EFR3BQ9Y2G0 817 aa17■□□□□ 0.31
MSH6-203ENST00000420813 KCTD3Q9Y597 815 aa17■□□□□ 0.31
MSH6-203ENST00000420813 PCDHB3Q9Y5E6 796 aa17■□□□□ 0.31
MSH6-203ENST00000420813 HECTD1Q9ULT8 2610 aa17■□□□□ 0.31
MSH6-203ENST00000420813 OR2AG2A6NM03 316 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 BUD23O43709 281 aaKnown RBP16.99■□□□□ 0.31
MSH6-203ENST00000420813 SPAG6O75602 509 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 PRAMEF1O95521 474 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 LPOP22079 712 aaPredicted RBP16.99■□□□□ 0.31
MSH6-203ENST00000420813 F8A1P23610 371 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 AKT1P31749 480 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 CA5AP35218 305 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 SEPT6Q14141 434 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 NFE2L1Q14494 772 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 SPA17Q15506 151 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 DEFB109BQ30KR1 87 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 C16orf46Q6P387 395 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 FAM83HQ6ZRV2 1179 aaPredicted RBP16.99■□□□□ 0.31
MSH6-203ENST00000420813 BPHLQ86WA6 291 aaPredicted RBP16.99■□□□□ 0.31
MSH6-203ENST00000420813 PTRH1Q86Y79 214 aaKnown RBP16.99■□□□□ 0.31
MSH6-203ENST00000420813 KMT5CQ86Y97 462 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 BEND7Q8N7W2 519 aaPredicted RBP16.99■□□□□ 0.31
MSH6-203ENST00000420813 ZNF398Q8TD17 642 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 ZFPM2Q8WW38 1151 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 KRT35Q92764 455 aa16.99■□□□□ 0.31
MSH6-203ENST00000420813 CALR3Q96L12 384 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms