RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GSTA4O15217 222 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 PRLP01236 227 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 RPS17P08708 135 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ZNF182P17025 639 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 UGT1A1P22309 533 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 UGT1A4P22310 534 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 UGT1A3P35503 534 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 UGT1A5P35504 534 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ATP4BP51164 291 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 EMP3P54852 163 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 TRAF2Q12933 501 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 MBTPS1Q14703 1052 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ABRAXAS2Q15018 415 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 AP5B1Q2VPB7 878 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 SLC36A3Q495N2 470 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 TMTC4Q5T4D3 741 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 PRMT9Q6P2P2 845 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 COLGALT2Q8IYK4 626 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 CARNMT1Q8N4J0 409 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 OR4F6Q8NGB9 312 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 OR10A6Q8NH74 314 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 CD200R1Q8TD46 325 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 SKA2Q8WVK7 121 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 GFM2Q969S9 779 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ZUFSPQ96AP4 578 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ZNF599Q96NL3 588 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 CCDC90BQ9GZT6 254 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 WARS2Q9UGM6 360 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 K7ERQ8 282 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ZBTB11O95625 1053 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 UROSP10746 265 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 CYBAP13498 195 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 OGNP20774 298 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 LPOP22079 712 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 SHMT2P34897 504 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 CA5AP35218 305 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 POLR2IP36954 125 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 TNK2Q07912 1038 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 PRKG2Q13237 762 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ARMC12Q5T9G4 340 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 PTRHD1Q6GMV3 140 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ENPP6Q6UWR7 440 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ABRAXAS1Q6UWZ7 409 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ANKRD46Q86W74 232 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 TMEM199Q8N511 208 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 RHEBL1Q8TAI7 183 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ITFG1Q8TB96 612 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 TMBIM1Q969X1 311 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 NPLQ9BXD5 320 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 FANCEQ9HB96 536 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 NLE1Q9NVX2 485 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 LMCD1Q9NZU5 365 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 KLQ9UEF7 1012 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 IGLV3-10A0A075B6K4 115 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 UPK3BL1B0FP48 263 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 UPK3BL2E5RIL1 263 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
LIMK1-202ENST00000418310 CAPGP40121 348 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 CYBRD1Q53TN4 286 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 SLC22A15Q8IZD6 547 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 KRTCAP2Q8N6L1 136 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 C8orf48Q96LL4 319 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 UROC1Q96N76 676 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 ASB2Q96Q27 587 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 MRGBPQ9NV56 204 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 Q9Y3F1 56 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 DGKBQ9Y6T7 804 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 PTGES3LE9PB15 166 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 E2F3O00716 465 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 ACSL4O60488 711 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 OAZ2O95190 189 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 MYF6P23409 242 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 MZF1P28698 734 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-202ENST00000418310 SLC26A3P40879 764 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 ZFP36L2P47974 494 aaKnown RBP11.74□□□□□ -0.53
LIMK1-202ENST00000418310 ERVK-8P63133 956 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 ATP1A4Q13733 1029 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 DUS1LQ6P1R4 473 aaKnown RBP11.74□□□□□ -0.53
LIMK1-202ENST00000418310 CYP20A1Q6UW02 462 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 SOCS4Q8WXH5 440 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 TRIB3Q96RU7 358 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 TRIM54Q9BYV2 358 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 IPPKQ9H8X2 491 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 CARS2Q9HA77 564 aaKnown RBP11.74□□□□□ -0.53
LIMK1-202ENST00000418310 TLR9Q9NR96 1032 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 PKD2L2Q9NZM6 624 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 IFT80Q9P2H3 777 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-202ENST00000418310 SLC30A1Q9Y6M5 507 aa11.74□□□□□ -0.53
LIMK1-202ENST00000418310 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 RASAL1O95294 804 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 MATN4O95460 622 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 TSPAN12O95859 305 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 KLKB1P03952 638 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 CKBP12277 381 aa11.73□□□□□ -0.53
LIMK1-202ENST00000418310 MAP4P27816 1152 aaKnown RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 CORO1AP31146 461 aaKnown RBP11.73□□□□□ -0.53
LIMK1-202ENST00000418310 MTHFRP42898 656 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms