RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 ACTR8Q9H981 624 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 POLR3BQ9NW08 1133 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 SUCOQ9UBS9 1254 aaKnown RBP13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 PNMA8CA0A1B0GUJ8 204 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 ESRRBO95718 433 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 MAP2K5Q13163 448 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 SPANXN4Q5MJ08 99 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 PM20D1Q6GTS8 502 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 FAM45BPQ6NSW5 357 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 CYHR1Q6ZMK1 362 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZNF621Q6ZSS3 439 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 KIAA2013Q8IYS2 634 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 TMEM86AQ8N2M4 240 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 FAM45AQ8TCE6 357 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 OSBPL6Q9BZF3 934 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 DPY30Q9C005 99 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 ABCB10Q9NRK6 738 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 KCNH4Q9UQ05 1017 aa13.05□□□□□ -0.32
TNFRSF8-203ENST00000417814 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 K7EPI3 171 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 M0R129 80 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 STAU1O95793 577 aaKnown RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 C1QCP02747 245 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 VARSP26640 1264 aaKnown RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 SHMT2P34897 504 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 NKX2-5P52952 324 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 LCP2Q13094 533 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 PRKG2Q13237 762 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 MAPKAPK3Q16644 382 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZBTB18Q99592 522 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ASB8Q9H765 288 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 RRAGCQ9HB90 399 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 TREX1Q9NSU2 369 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 PTCH2Q9Y6C5 1203 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 LDB2O43679 373 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 COL6A2P12110 1019 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 IL12AP29459 219 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 TMED10P49755 219 aaKnown RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 SLC15A4Q8N697 577 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ATG16L2Q8NAA4 619 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 BDH2Q9BUT1 245 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 TOR3AQ9H497 397 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 MEAF6Q9HAF1 191 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 UBA2Q9UBT2 640 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 RAI2Q9Y5P3 530 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 KDM1AO60341 852 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 TBC1D4O60343 1298 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 COL6A1P12109 1028 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZNF24P17028 368 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 NUP107P57740 925 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 RHOAP61586 193 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 SMN1Q16637 294 aaKnown RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 VARS2Q5ST30 1063 aaKnown RBP13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 LETMD1Q6P1Q0 360 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ADCK1Q86TW2 530 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZNF555Q8NEP9 628 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 TRPV3Q8NET8 790 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ACBD6Q9BR61 282 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 GPR62Q9BZJ7 368 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZNF696Q9H7X3 374 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 KIF17Q9P2E2 1029 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 CRLS1Q9UJA2 301 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 WDR37Q9Y2I8 494 aa13.04□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 INMTO95050 263 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 CCNA2P20248 432 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 MAGEA12P43365 314 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 NUDT6P53370 316 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 VBP1P61758 197 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 PURAQ00577 322 aaKnown RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 LRRC74AQ0VAA2 488 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZNF177Q13360 481 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 PLD1Q13393 1074 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 ABRAXAS2Q15018 415 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 CRTC3Q6UUV7 619 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 OR2T12Q8NG77 320 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 OR4F6Q8NGB9 312 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 PSMA8Q8TAA3 256 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 FAM120BQ96EK7 910 aaKnown RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 OR52E6Q96RD3 313 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 C6orf62Q9GZU0 229 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 OLA1Q9NTK5 396 aaKnown RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 SPATA7Q9P0W8 599 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 TMEM181Q9P2C4 612 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 LRFN2Q9ULH4 789 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 CORINQ9Y5Q5 1042 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 SMIM30A4D0T7 59 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 G3V2T6 193 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 RPP40O75818 363 aaKnown RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 AXLP30530 894 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 AKT1P31749 480 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 TUSC3Q13454 348 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 TGFBIQ15582 683 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 KCNA10Q16322 511 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms