RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MSH3P20585 1137 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 ADRA1AP35348 466 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 CTSCP53634 463 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 CYP4F2P78329 520 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 CLCA4Q14CN2 919 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 KIAA1143Q96AT1 154 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 TGM7Q96PF1 710 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 PPP1R2P1Q96PQ5 205 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 GORASP1Q9BQQ3 440 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 RBSNQ9H1K0 784 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 APMAPQ9HDC9 416 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 EPHA6Q9UF33 1036 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 WDR37Q9Y2I8 494 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 ARL5AQ9Y689 179 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 ATMQ13315 3056 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 ZNF462Q96JM2 2506 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 ZNF891A8MT65 544 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 J3QKU1 62 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 KCNN4O15554 427 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 STK17BO94768 372 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 PSMB4P28070 264 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 CA5AP35218 305 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 VAV2P52735 878 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 PDE1BQ01064 536 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 ABHD18Q0P651 414 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 GPR18Q14330 331 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 LONRF2Q1L5Z9 754 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 RAD9BQ6WBX8 426 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 ZDHHC12Q96GR4 267 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 SLC45A3Q96JT2 553 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 LACRTQ9GZZ8 138 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 RAB33BQ9H082 229 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 ZNF768Q9H5H4 540 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 SIDT1Q9NXL6 827 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 REXO2Q9Y3B8 237 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 KALRNO60229 2985 aa17.25■□□□□ 0.35
PDLIM2-208ENST00000416159 HELZ2Q9BYK8 2649 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 KLHL33A6NCF5 533 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 OR2AG2A6NM03 316 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 GPR39O43194 453 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 PRAMEF1O95521 474 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 CRTAMO95727 393 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 PYGMP11217 842 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 AKT1P31749 480 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 CAPZBP47756 277 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 LEPRP48357 1165 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 FOXM1Q08050 763 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 MAP7Q14244 749 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 PTPRCAPQ14761 206 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 RPE65Q16518 533 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 CACHD1Q5VU97 1274 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 TIPARPQ7Z3E1 657 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 PRSS42Q7Z5A4 293 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 LRRC57Q8N9N7 239 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 OR4K2Q8NGD2 314 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 RSC1A1Q92681 617 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 LRRC45Q96CN5 670 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 SPATA13Q96N96 652 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 C19orf43Q9BQ61 176 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 ASB8Q9H765 288 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 GPN2Q9H9Y4 310 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 AMFRQ9UKV5 643 aa17.24■□□□□ 0.35
PDLIM2-208ENST00000416159 PIEZO2Q9H5I5 2752 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 LOC101059948A0A1B0GTJ6 334 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 MGAT4DA6NG13 374 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 RASSF9O75901 435 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 SRP72O76094 671 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 DLGAP3O95886 979 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 ITGB6P18564 788 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 SEPHS1P49903 392 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 NFATC3Q12968 1075 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 NFE2L1Q14494 772 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 IL11RAQ14626 422 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 FNBP1LQ5T0N5 605 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 METRNLQ641Q3 311 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 KLHL35Q6PF15 583 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 ESX1Q8N693 406 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 BEND7Q8N7W2 519 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 TTC13Q8NBP0 860 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 ACRBPQ8NEB7 543 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 CCDC110Q8TBZ0 833 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 ALG3Q92685 438 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 CATSPER2Q96P56 530 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 FAM118BQ9BPY3 351 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 APOL2Q9BQE5 337 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 FAM117AQ9C073 453 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 FEZ2Q9UHY8 353 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 FKBPLQ9UIM3 349 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 PSMD13Q9UNM6 376 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 KCTD3Q9Y597 815 aa17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 HEMK1Q9Y5R4 338 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-208ENST00000416159 GRID2IPA4D2P6 1211 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 GOLGA6L9A6NEM1 432 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 FAM87AP0C7U9 286 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 XIAPP98170 497 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 MSLNQ13421 630 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 IRGCQ6NXR0 463 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 AADACL2Q6P093 401 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms